RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
PRPF3-203ENST00000467514 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
PRPF3-203ENST00000467514 KIF16BQ96L93 1317 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 RLBP1P12271 317 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 SREBF2Q12772 1141 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 ARHGAP45Q92619 1136 aa13.92□□□□□ -0.18
PRPF3-203ENST00000467514 SCN9AQ15858 1988 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 GPR25O00155 361 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 FKTNO75072 461 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 TRIM27P14373 513 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
PRPF3-203ENST00000467514 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
PRPF3-203ENST00000467514 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
PRPF3-203ENST00000467514 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
PRPF3-203ENST00000467514 VIL1P09327 827 aaKnown RBP13.9□□□□□ -0.18
PRPF3-203ENST00000467514 HOXB7P09629 217 aa13.9□□□□□ -0.18
PRPF3-203ENST00000467514 PDIA6Q15084 440 aa13.9□□□□□ -0.18
PRPF3-203ENST00000467514 RSBN1LQ6PCB5 846 aaPredicted RBP13.9□□□□□ -0.18
PRPF3-203ENST00000467514 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
PRPF3-203ENST00000467514 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
PRPF3-203ENST00000467514 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
PRPF3-203ENST00000467514 SCAF8Q9UPN6 1271 aaKnown RBP13.9□□□□□ -0.18
PRPF3-203ENST00000467514 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
PRPF3-203ENST00000467514 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
PRPF3-203ENST00000467514 AGBL3Q8NEM8 1001 aa13.89□□□□□ -0.19
PRPF3-203ENST00000467514 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
PRPF3-203ENST00000467514 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 MS4A1P11836 297 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
PRPF3-203ENST00000467514 PRKG1Q13976 671 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 DZIP1LQ8IYY4 767 aaKnown RBP13.88□□□□□ -0.19
PRPF3-203ENST00000467514 TRIM17Q9Y577 477 aa13.88□□□□□ -0.19
PRPF3-203ENST00000467514 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-203ENST00000467514 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
PRPF3-203ENST00000467514 ZNF280AP59817 542 aaPredicted RBP13.87□□□□□ -0.19
PRPF3-203ENST00000467514 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
PRPF3-203ENST00000467514 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
PRPF3-203ENST00000467514 ARMC9Q7Z3E5 817 aa13.87□□□□□ -0.19
PRPF3-203ENST00000467514 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
PRPF3-203ENST00000467514 PSME4Q14997 1843 aa13.87□□□□□ -0.19
PRPF3-203ENST00000467514 AAMPQ13685 434 aa13.86□□□□□ -0.19
PRPF3-203ENST00000467514 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
PRPF3-203ENST00000467514 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
PRPF3-203ENST00000467514 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
PRPF3-203ENST00000467514 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 ALDH1A1P00352 501 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 TM4SF4P48230 202 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
PRPF3-203ENST00000467514 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
PRPF3-203ENST00000467514 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 PLBD2Q8NHP8 589 aa13.85□□□□□ -0.19
PRPF3-203ENST00000467514 CCDC152Q4G0S7 254 aa13.84□□□□□ -0.19
PRPF3-203ENST00000467514 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
PRPF3-203ENST00000467514 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
PRPF3-203ENST00000467514 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-203ENST00000467514 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
PRPF3-203ENST00000467514 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
PRPF3-203ENST00000467514 PTPRCP08575 1304 aa13.84□□□□□ -0.19
PRPF3-203ENST00000467514 COL4A1P02462 1669 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 POTEFA5A3E0 1075 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 NBPF9Q3BBW0 867 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 G2E3Q7L622 706 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 SEC31BQ9NQW1 1179 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
PRPF3-203ENST00000467514 XDHP47989 1333 aa13.83□□□□□ -0.2
PRPF3-203ENST00000467514 ZNF609O15014 1411 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 SASH1O94885 1247 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 RIC3Q7Z5B4 369 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 ANKRD18AQ8IVF6 992 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
PRPF3-203ENST00000467514 ISCA1Q9BUE6 129 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
PRPF3-203ENST00000467514 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 SPEF2Q9C093 1822 aa13.81□□□□□ -0.2
PRPF3-203ENST00000467514 MANSC4A6NHS7 340 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
PRPF3-203ENST00000467514 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 OTOP1Q7RTM1 612 aa13.81□□□□□ -0.2
PRPF3-203ENST00000467514 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 ERO1AQ96HE7 468 aa13.81□□□□□ -0.2
PRPF3-203ENST00000467514 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
PRPF3-203ENST00000467514 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
PRPF3-203ENST00000467514 SPRYD7Q5W111 196 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms