RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 MYD88Q99836 296 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 CTNNA3Q9UI47 895 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 CTDNEP1O95476 244 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 TUBB4AP04350 444 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 AIMP1Q12904 312 aaKnown RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 SLFNL1Q499Z3 407 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 CEP57L1Q8IYX8 460 aa11.38□□□□□ -0.59
APTX-214ENST00000467331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
APTX-214ENST00000467331 NAT10Q9H0A0 1025 aaKnown RBP11.38□□□□□ -0.59
APTX-214ENST00000467331 ERBB3P21860 1342 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 TJP1Q07157 1748 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 CBX1P83916 185 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 GABPB1Q06547 395 aaPredicted RBP11.37□□□□□ -0.59
APTX-214ENST00000467331 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 EDC3Q96F86 508 aaKnown RBP11.37□□□□□ -0.59
APTX-214ENST00000467331 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 RTEL1Q9NZ71 1219 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 COL18A1P39060 1754 aa11.37□□□□□ -0.59
APTX-214ENST00000467331 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
APTX-214ENST00000467331 CCZ1BP86790 482 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 CCZ1P86791 482 aaPredicted RBP11.36□□□□□ -0.59
APTX-214ENST00000467331 ESCO1Q5FWF5 840 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 DBNDD2Q9BQY9 259 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 DDX41Q9UJV9 622 aaKnown RBP11.36□□□□□ -0.59
APTX-214ENST00000467331 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.599e-15■■■■■ 42.9
APTX-214ENST00000467331 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 USP28Q96RU2 1077 aa11.36□□□□□ -0.59
APTX-214ENST00000467331 MORC2Q9Y6X9 1032 aaPredicted RBP11.36□□□□□ -0.59
APTX-214ENST00000467331 BECN2A8MW95 431 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 YEATS4O95619 227 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 PHKG2P15735 406 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 CCDC129Q6ZRS4 1044 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
APTX-214ENST00000467331 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
APTX-214ENST00000467331 DDX11Q96FC9 970 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ARID3AQ99856 593 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 CARMIL3Q8ND23 1372 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 SKILP12757 684 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 FAM193AP78312 1265 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
APTX-214ENST00000467331 CCDC150Q8NCX0 1101 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
APTX-214ENST00000467331 PLBD2Q8NHP8 589 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
APTX-214ENST00000467331 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 H7C1W4 665 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
APTX-214ENST00000467331 FGD1P98174 961 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 FSIP1Q8NA03 581 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
APTX-214ENST00000467331 DNAJC2Q99543 621 aaKnown RBP11.34□□□□□ -0.59
APTX-214ENST00000467331 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 FAM53CQ9NYF3 392 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 UBR2Q8IWV8 1755 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
APTX-214ENST00000467331 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 E7EWF7 191 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 CIAO1O76071 339 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 IL15P40933 162 aaPredicted RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 KCNG4Q8TDN1 519 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 RAPGEF4Q8WZA2 1011 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 MEGF6O75095 1541 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 NWD2Q9ULI1 1742 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 MYL6BP14649 208 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 TATP17735 454 aaPredicted RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 FOXO4P98177 505 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
APTX-214ENST00000467331 ATG9AQ7Z3C6 839 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 IFNL2Q8IZJ0 200 aa11.33□□□□□ -0.6
APTX-214ENST00000467331 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms