RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
VPS50-209ENST00000467326 A0A0A0MRY4 1105 aa6.98□□□□□ -1.29
VPS50-209ENST00000467326 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
VPS50-209ENST00000467326 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
VPS50-209ENST00000467326 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
VPS50-209ENST00000467326 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
VPS50-209ENST00000467326 FAM129BQ96TA1 746 aa6.98□□□□□ -1.29
VPS50-209ENST00000467326 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
VPS50-209ENST00000467326 EREGO14944 169 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 ACPPP15309 386 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 LRP8Q14114 963 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 PRSS36Q5K4E3 855 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 CEP135Q66GS9 1140 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
VPS50-209ENST00000467326 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
VPS50-209ENST00000467326 DTWD1Q8N5C7 304 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 CEP120Q8N960 986 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 PBX4Q9BYU1 374 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
VPS50-209ENST00000467326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.97□□□□□ -1.29
VPS50-209ENST00000467326 GPR182O15218 404 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 H2AFB1P0C5Y9 115 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 H2AFB2P0C5Z0 115 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
VPS50-209ENST00000467326 EDN3P14138 238 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 ELNP15502 786 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 FOXD4L6Q3SYB3 417 aaPredicted RBP6.96□□□□□ -1.3
VPS50-209ENST00000467326 FOXD4L3Q6VB84 417 aaPredicted RBP6.96□□□□□ -1.3
VPS50-209ENST00000467326 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 CITED4Q96RK1 184 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.3
VPS50-209ENST00000467326 C9orf172C9J069 976 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 ILDR2Q71H61 639 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 CACTIN-AS1Q8N1I8 211 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 IL22RA1Q8N6P7 574 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 RBCK1Q9BYM8 510 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 DCTN4Q9UJW0 460 aa6.95□□□□□ -1.3
VPS50-209ENST00000467326 NEFLP07196 543 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 PTPRAP18433 802 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 GRIK4Q16099 956 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
VPS50-209ENST00000467326 FAM177BA6PVY3 158 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 IGHA2P01877 340 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 MAPK1P28482 360 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 CDC27P30260 824 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 ORC1Q13415 861 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 HHIPQ96QV1 700 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 OSMRQ99650 979 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
VPS50-209ENST00000467326 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
VPS50-209ENST00000467326 PDE2AO00408 941 aaPredicted RBP6.92□□□□□ -1.3
VPS50-209ENST00000467326 DEAF1O75398 565 aaPredicted RBP6.92□□□□□ -1.3
VPS50-209ENST00000467326 POLR3DP05423 398 aaPredicted RBP6.92□□□□□ -1.3
VPS50-209ENST00000467326 NRG1Q02297 640 aaPredicted RBP6.92□□□□□ -1.3
VPS50-209ENST00000467326 TMC7Q7Z402 723 aa6.92□□□□□ -1.3
VPS50-209ENST00000467326 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
VPS50-209ENST00000467326 AEBP1Q8IUX7 1158 aa6.92□□□□□ -1.3
VPS50-209ENST00000467326 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
VPS50-209ENST00000467326 POP1Q99575 1024 aaKnown RBP6.92□□□□□ -1.3
VPS50-209ENST00000467326 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
VPS50-209ENST00000467326 NFKBIEO00221 500 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 CPNE3O75131 537 aaKnown RBP6.91□□□□□ -1.3
VPS50-209ENST00000467326 TRPA1O75762 1119 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 EPHA1P21709 976 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 PEAR1Q5VY43 1037 aaPredicted RBP6.91□□□□□ -1.3
VPS50-209ENST00000467326 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
VPS50-209ENST00000467326 DCAF11Q8TEB1 546 aa6.91□□□□□ -1.3
VPS50-209ENST00000467326 ALKBH8Q96BT7 664 aaKnown RBP6.91□□□□□ -1.3
VPS50-209ENST00000467326 SELPP16109 830 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 GALNT12Q8IXK2 581 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 NIF3L1Q9GZT8 377 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 ADAM19Q9H013 955 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 NPHS2Q9NP85 383 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 SH2B1Q9NRF2 756 aaPredicted RBP6.9□□□□□ -1.3
VPS50-209ENST00000467326 USP21Q9UK80 565 aa6.9□□□□□ -1.3
VPS50-209ENST00000467326 H3BRJ5 948 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 DLL1O00548 723 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
VPS50-209ENST00000467326 CDC25BP30305 580 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 CABP4P57796 275 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 FAM117BQ6P1L5 589 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
VPS50-209ENST00000467326 BHLHE41Q9C0J9 482 aaPredicted RBP6.89□□□□□ -1.31
VPS50-209ENST00000467326 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
VPS50-209ENST00000467326 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
VPS50-209ENST00000467326 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
VPS50-209ENST00000467326 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms