RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 IL15P40933 162 aaPredicted RBP13.75□□□□□ -0.21
MSH5-212ENST00000467319 KCNJ4P48050 445 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
MSH5-212ENST00000467319 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 DOK7Q18PE1 504 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 SIL1Q9H173 461 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
MSH5-212ENST00000467319 SCNN1DP51172 638 aa13.74□□□□□ -0.21
MSH5-212ENST00000467319 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
MSH5-212ENST00000467319 CIAPIN1Q6FI81 312 aa13.74□□□□□ -0.21
MSH5-212ENST00000467319 DPY19L2Q6NUT2 758 aa13.74□□□□□ -0.21
MSH5-212ENST00000467319 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
MSH5-212ENST00000467319 RAD17O75943 681 aa13.73□□□□□ -0.21
MSH5-212ENST00000467319 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
MSH5-212ENST00000467319 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
MSH5-212ENST00000467319 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
MSH5-212ENST00000467319 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
MSH5-212ENST00000467319 PSMD14O00487 310 aa13.72□□□□□ -0.21
MSH5-212ENST00000467319 IL1R1P14778 569 aa13.72□□□□□ -0.21
MSH5-212ENST00000467319 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
MSH5-212ENST00000467319 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
MSH5-212ENST00000467319 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
MSH5-212ENST00000467319 GMPSP49915 693 aaPredicted RBP13.71□□□□□ -0.21
MSH5-212ENST00000467319 TNIP1Q15025 636 aa13.71□□□□□ -0.21
MSH5-212ENST00000467319 ATP2B3Q16720 1220 aa13.71□□□□□ -0.21
MSH5-212ENST00000467319 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
MSH5-212ENST00000467319 LPIN2Q92539 896 aa13.71□□□□□ -0.21
MSH5-212ENST00000467319 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
MSH5-212ENST00000467319 CD209Q9NNX6 404 aa13.71□□□□□ -0.21
MSH5-212ENST00000467319 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
MSH5-212ENST00000467319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
MSH5-212ENST00000467319 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 ZBTB22O15209 634 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 SASH1O94885 1247 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 VEGFAP15692 232 aaPredicted RBP13.7□□□□□ -0.22
MSH5-212ENST00000467319 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
MSH5-212ENST00000467319 GYG1P46976 350 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 GMLQ99445 158 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 TAF1DQ9H5J8 278 aaPredicted RBP13.7□□□□□ -0.22
MSH5-212ENST00000467319 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
MSH5-212ENST00000467319 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 IFIT1P09914 478 aaKnown RBP13.69□□□□□ -0.22
MSH5-212ENST00000467319 SLC5A1P13866 664 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 TFCP2Q12800 502 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 STRIP1Q5VSL9 837 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
MSH5-212ENST00000467319 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
MSH5-212ENST00000467319 DPF2Q92785 391 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
MSH5-212ENST00000467319 FAM205AQ6ZU69 1335 aa13.68□□□□□ -0.22
MSH5-212ENST00000467319 G3V3G9 751 aa13.68□□□□□ -0.22
MSH5-212ENST00000467319 HMMRO75330 724 aa13.68□□□□□ -0.22
MSH5-212ENST00000467319 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
MSH5-212ENST00000467319 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
MSH5-212ENST00000467319 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
MSH5-212ENST00000467319 GPR108Q9NPR9 543 aa13.68□□□□□ -0.22
MSH5-212ENST00000467319 MYO3BQ8WXR4 1341 aa13.67□□□□□ -0.22
MSH5-212ENST00000467319 SHTN1A0MZ66 631 aa13.67□□□□□ -0.22
MSH5-212ENST00000467319 ADORA1P30542 326 aa13.67□□□□□ -0.22
MSH5-212ENST00000467319 EPHX2P34913 555 aa13.67□□□□□ -0.22
MSH5-212ENST00000467319 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSH5-212ENST00000467319 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
MSH5-212ENST00000467319 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
MSH5-212ENST00000467319 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
MSH5-212ENST00000467319 A0A1B0GUL7 405 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 TOMM70O94826 608 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
MSH5-212ENST00000467319 EPS15P42566 896 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 BCAMP50895 628 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 ZNF280AP59817 542 aaPredicted RBP13.66□□□□□ -0.22
MSH5-212ENST00000467319 FKBP1AP62942 108 aaKnown RBP13.66□□□□□ -0.22
MSH5-212ENST00000467319 GTF2IP78347 998 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
MSH5-212ENST00000467319 EXOC6BQ9Y2D4 811 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 AKAP2Q9Y2D5 859 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
MSH5-212ENST00000467319 PDS5AQ29RF7 1337 aaKnown RBP13.65□□□□□ -0.22
MSH5-212ENST00000467319 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 PHKA1P46020 1223 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 AAMPQ13685 434 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 TNNI3KQ59H18 835 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 TRPM4Q8TD43 1214 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 MXD3Q9BW11 206 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 ADARB2Q9NS39 739 aaKnown RBP13.65□□□□□ -0.22
MSH5-212ENST00000467319 FPGT-TNNI3KV9GXZ4 949 aa13.65□□□□□ -0.22
MSH5-212ENST00000467319 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
MSH5-212ENST00000467319 HSP90AB4PQ58FF6 505 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms