RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 HSPA4P34932 840 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 CCDC152Q4G0S7 254 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 FAM182BQ5T319 152 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 LDHAL6AQ6ZMR3 332 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 VGLL2Q8N8G2 317 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 ZNF512BQ96KM6 892 aaPredicted RBP11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 IL25Q9H293 177 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
APOBEC1-202ENST00000467171 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.56
APOBEC1-202ENST00000467171 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 GNPATO15228 680 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 TIMM10P62072 90 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 KCNB2Q92953 911 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 NEUROD6Q96NK8 337 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 FSD1Q9BTV5 496 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.57
APOBEC1-202ENST00000467171 ZPR1O75312 459 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 MCM2P49736 904 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 METTL24Q5JXM2 366 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 CCDC85AQ96PX6 553 aaPredicted RBP11.51□□□□□ -0.57
APOBEC1-202ENST00000467171 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 LRP5O75197 1615 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 ANKRD36CQ5JPF3 1778 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 PDE8BO95263 885 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 FGFR2P21802 821 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 KCNQ4P56696 695 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 TRAPPC3LQ5T215 181 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 MED23Q9ULK4 1368 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 KAT6BQ8WYB5 2073 aa11.5□□□□□ -0.57
APOBEC1-202ENST00000467171 BTAF1O14981 1849 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 IFIT1P09914 478 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 DDIT3P35638 169 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 PUM3Q15397 648 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 LPIN2Q92539 896 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 SETDB2Q96T68 719 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 CDC5LQ99459 802 aaKnown RBP11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
APOBEC1-202ENST00000467171 A0A0D9SFI3 127 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 ADORA1P30542 326 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 TTC39AQ5SRH9 613 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 HELLSQ9NRZ9 838 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 CHMP5Q9NZZ3 219 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 NUP98P52948 1817 aa11.48□□□□□ -0.57
APOBEC1-202ENST00000467171 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 ZFYP08048 801 aaPredicted RBP11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 SSFA2P28290 1259 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 RFC4P35249 363 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 MCMDC2Q4G0Z9 681 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 AMIGO3Q86WK7 504 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
APOBEC1-202ENST00000467171 BCORQ6W2J9 1755 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 LY75O60449 1722 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 GOLIM4O00461 696 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 PLSCR1O15162 318 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 TAF5LO75529 589 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms