RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KIAA2012Q0VF49 1180 aa18.71■□□□□ 0.59
NPHP4-205ENST00000466897 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
NPHP4-205ENST00000466897 CENPQQ7L2Z9 268 aaPredicted RBP18.71■□□□□ 0.59
NPHP4-205ENST00000466897 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
NPHP4-205ENST00000466897 CLASRPQ8N2M8 674 aaKnown RBP18.71■□□□□ 0.59
NPHP4-205ENST00000466897 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
NPHP4-205ENST00000466897 ZNF646O15015 1829 aaPredicted RBP18.71■□□□□ 0.59
NPHP4-205ENST00000466897 A0A1B0GUL7 405 aa18.7■□□□□ 0.58
NPHP4-205ENST00000466897 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
NPHP4-205ENST00000466897 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
NPHP4-205ENST00000466897 IARSP41252 1262 aaKnown RBP18.69■□□□□ 0.58
NPHP4-205ENST00000466897 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
NPHP4-205ENST00000466897 WTIPA6NIX2 430 aaPredicted RBP18.68■□□□□ 0.58
NPHP4-205ENST00000466897 SNAP23O00161 211 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 APBB1O00213 710 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 LMNB1P20700 586 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 NUCB1Q02818 461 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 EAF2Q96CJ1 260 aaPredicted RBP18.68■□□□□ 0.58
NPHP4-205ENST00000466897 IL1RAPL2Q9NP60 686 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 COL4A5P29400 1685 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
NPHP4-205ENST00000466897 TIMM10P62072 90 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 RASSF7Q02833 373 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 CAVIN4Q5BKX8 364 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 COA1Q9GZY4 146 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 ZNF277Q9NRM2 450 aaPredicted RBP18.67■□□□□ 0.58
NPHP4-205ENST00000466897 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
NPHP4-205ENST00000466897 UTRNP46939 3433 aa18.67■□□□□ 0.58
NPHP4-205ENST00000466897 PPIP5K2O43314 1243 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 KLRK1P26718 216 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 ZNF804AQ7Z570 1209 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 FBXO33Q7Z6M2 555 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 AACSQ86V21 672 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 TXNRD3Q86VQ6 643 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 XAGE2Q96GT9 111 aa18.66■□□□□ 0.58
NPHP4-205ENST00000466897 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
NPHP4-205ENST00000466897 IFIT2P09913 472 aaKnown RBP18.65■□□□□ 0.58
NPHP4-205ENST00000466897 PRELPP51888 382 aa18.65■□□□□ 0.58
NPHP4-205ENST00000466897 AOC3Q16853 763 aa18.65■□□□□ 0.58
NPHP4-205ENST00000466897 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
NPHP4-205ENST00000466897 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
NPHP4-205ENST00000466897 FAM84BQ96KN1 310 aaPredicted RBP18.65■□□□□ 0.58
NPHP4-205ENST00000466897 DBNLQ9UJU6 430 aaKnown RBP18.65■□□□□ 0.58
NPHP4-205ENST00000466897 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
NPHP4-205ENST00000466897 IL1R1P14778 569 aa18.64■□□□□ 0.57
NPHP4-205ENST00000466897 HIBADHP31937 336 aaKnown RBP18.64■□□□□ 0.57
NPHP4-205ENST00000466897 PODNQ7Z5L7 613 aa18.64■□□□□ 0.57
NPHP4-205ENST00000466897 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
NPHP4-205ENST00000466897 ZNF512BQ96KM6 892 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-205ENST00000466897 NEUROD6Q96NK8 337 aa18.64■□□□□ 0.57
NPHP4-205ENST00000466897 GPR101Q96P66 508 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-205ENST00000466897 RIMBP2O15034 1052 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 SEMA3EO15041 775 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 ADORA1P30542 326 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 GYG1P46976 350 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 DBNDD2Q9BQY9 259 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 CD209Q9NNX6 404 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 PDS5AQ29RF7 1337 aaKnown RBP18.63■□□□□ 0.57
NPHP4-205ENST00000466897 SALL3Q9BXA9 1300 aa18.63■□□□□ 0.57
NPHP4-205ENST00000466897 YY1P25490 414 aa18.62■□□□□ 0.57
NPHP4-205ENST00000466897 ARID4AP29374 1257 aaPredicted RBP18.62■□□□□ 0.57
NPHP4-205ENST00000466897 CCDC158Q5M9N0 1113 aa18.62■□□□□ 0.57
NPHP4-205ENST00000466897 VPS37DQ86XT2 251 aa18.62■□□□□ 0.57
NPHP4-205ENST00000466897 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
NPHP4-205ENST00000466897 TDRD7Q8NHU6 1098 aaKnown RBP18.62■□□□□ 0.57
NPHP4-205ENST00000466897 JDP2Q8WYK2 163 aa18.62■□□□□ 0.57
NPHP4-205ENST00000466897 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
NPHP4-205ENST00000466897 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
NPHP4-205ENST00000466897 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
NPHP4-205ENST00000466897 DOCK2Q92608 1830 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 FZD9O00144 591 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 ECE2O60344 883 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 UQCRFS1P1P0C7P4 283 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 BCAMP50895 628 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.61■□□□□ 0.57
NPHP4-205ENST00000466897 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 ZNRF3Q9ULT6 936 aa18.61■□□□□ 0.57
NPHP4-205ENST00000466897 G3V3G9 751 aa18.6■□□□□ 0.57
NPHP4-205ENST00000466897 PHKA1P46020 1223 aa18.6■□□□□ 0.57
NPHP4-205ENST00000466897 DCAF8Q5TAQ9 597 aa18.6■□□□□ 0.57
NPHP4-205ENST00000466897 GPATCH3Q96I76 525 aa18.6■□□□□ 0.57
NPHP4-205ENST00000466897 DBNDD1Q9H9R9 158 aa18.6■□□□□ 0.57
NPHP4-205ENST00000466897 AOX1Q06278 1338 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 FAM205AQ6ZU69 1335 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 MX1P20591 662 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 DOK7Q18PE1 504 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 ECHDC1Q9NTX5 307 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 STAP2Q9UGK3 403 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 MYH7P12883 1935 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 AK9Q5TCS8 1911 aa18.59■□□□□ 0.57
NPHP4-205ENST00000466897 COL1A1P02452 1464 aaPredicted RBP18.58■□□□□ 0.57
NPHP4-205ENST00000466897 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.57
NPHP4-205ENST00000466897 YDJCA8MPS7 323 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms