RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 AOC2O75106 756 aa22.22■■□□□ 1.15
COL7A1-206ENST00000466591 EGFRP00533 1210 aa22.22■■□□□ 1.15
COL7A1-206ENST00000466591 MAP2K2P36507 400 aa22.22■■□□□ 1.15
COL7A1-206ENST00000466591 IFIT5Q13325 482 aaKnown RBP22.22■■□□□ 1.15
COL7A1-206ENST00000466591 GBA2Q9HCG7 927 aaPredicted RBP22.21■■□□□ 1.15
COL7A1-206ENST00000466591 ZNF804BA4D1E1 1349 aa22.21■■□□□ 1.15
COL7A1-206ENST00000466591 CACNA1FO60840 1977 aa22.21■■□□□ 1.15
COL7A1-206ENST00000466591 SCARF1Q14162 830 aa22.2■■□□□ 1.14
COL7A1-206ENST00000466591 HHIPL1Q96JK4 782 aa22.2■■□□□ 1.14
COL7A1-206ENST00000466591 COA1Q9GZY4 146 aa22.2■■□□□ 1.14
COL7A1-206ENST00000466591 MYOZ2Q9NPC6 264 aa22.2■■□□□ 1.14
COL7A1-206ENST00000466591 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
COL7A1-206ENST00000466591 ANGEL2Q5VTE6 544 aaKnown RBP22.19■■□□□ 1.14
COL7A1-206ENST00000466591 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
COL7A1-206ENST00000466591 MYO3BQ8WXR4 1341 aa22.19■■□□□ 1.14
COL7A1-206ENST00000466591 HSPA8P11142 646 aaKnown RBP22.18■■□□□ 1.14
COL7A1-206ENST00000466591 HDAC9Q9UKV0 1011 aa22.18■■□□□ 1.14
COL7A1-206ENST00000466591 SCN9AQ15858 1988 aa22.18■■□□□ 1.14
COL7A1-206ENST00000466591 GRM8O00222 908 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 CSF1RP07333 972 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 ZNF280AP59817 542 aaPredicted RBP22.17■■□□□ 1.14
COL7A1-206ENST00000466591 CHRNDQ07001 517 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 NOGQ13253 232 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 DLK2Q6UY11 383 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 CNNM1Q9NRU3 951 aa22.17■■□□□ 1.14
COL7A1-206ENST00000466591 WTIPA6NIX2 430 aaPredicted RBP22.16■■□□□ 1.14
COL7A1-206ENST00000466591 CA12O43570 354 aa22.16■■□□□ 1.14
COL7A1-206ENST00000466591 CASP7P55210 303 aa22.16■■□□□ 1.14
COL7A1-206ENST00000466591 STRIP1Q5VSL9 837 aa22.16■■□□□ 1.14
COL7A1-206ENST00000466591 PLIN1O60240 522 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 ZNF157P51786 506 aaPredicted RBP22.15■■□□□ 1.14
COL7A1-206ENST00000466591 TTLL5Q6EMB2 1281 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 RGMBQ6NW40 437 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 LMBR1LQ6UX01 489 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 CDCA5Q96FF9 252 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 TSKSQ9UJT2 592 aa22.15■■□□□ 1.14
COL7A1-206ENST00000466591 ASTN2O75129 1339 aaPredicted RBP22.14■■□□□ 1.14
COL7A1-206ENST00000466591 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.13
COL7A1-206ENST00000466591 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
COL7A1-206ENST00000466591 CCDC102AQ96A19 550 aa22.14■■□□□ 1.13
COL7A1-206ENST00000466591 MXD3Q9BW11 206 aa22.14■■□□□ 1.13
COL7A1-206ENST00000466591 ZNF609O15014 1411 aa22.14■■□□□ 1.13
COL7A1-206ENST00000466591 THSD7BQ9C0I4 1608 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 TAF5LO75529 589 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 GTF2IP78347 998 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 DACT2Q5SW24 774 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 LDHAL6AQ6ZMR3 332 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 ZNF804AQ7Z570 1209 aa22.13■■□□□ 1.13
COL7A1-206ENST00000466591 HELBQ8NG08 1087 aaPredicted RBP22.13■■□□□ 1.13
COL7A1-206ENST00000466591 E9PSI1 815 aa22.12■■□□□ 1.13
COL7A1-206ENST00000466591 NF2P35240 595 aa22.12■■□□□ 1.13
COL7A1-206ENST00000466591 FOXO4P98177 505 aa22.12■■□□□ 1.13
COL7A1-206ENST00000466591 KIAA0825Q8IV33 1275 aa22.12■■□□□ 1.13
COL7A1-206ENST00000466591 PITPNM2Q9BZ72 1349 aa22.11■■□□□ 1.13
COL7A1-206ENST00000466591 PSME4Q14997 1843 aa22.11■■□□□ 1.13
COL7A1-206ENST00000466591 KLRK1P26718 216 aa22.11■■□□□ 1.13
COL7A1-206ENST00000466591 TXNRD3Q86VQ6 643 aa22.11■■□□□ 1.13
COL7A1-206ENST00000466591 GMLQ99445 158 aa22.11■■□□□ 1.13
COL7A1-206ENST00000466591 MMP14P50281 582 aa22.1■■□□□ 1.13
COL7A1-206ENST00000466591 SASH1O94885 1247 aa22.09■■□□□ 1.13
COL7A1-206ENST00000466591 NBPF9Q3BBW0 867 aa22.09■■□□□ 1.13
COL7A1-206ENST00000466591 ZNF594Q96JF6 807 aaPredicted RBP22.09■■□□□ 1.13
COL7A1-206ENST00000466591 CD209Q9NNX6 404 aa22.09■■□□□ 1.13
COL7A1-206ENST00000466591 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.13
COL7A1-206ENST00000466591 SCAF8Q9UPN6 1271 aaKnown RBP22.08■■□□□ 1.13
COL7A1-206ENST00000466591 FKBP1BP68106 108 aa22.07■■□□□ 1.12
COL7A1-206ENST00000466591 APOBEC3FQ8IUX4 373 aaKnown RBP22.07■■□□□ 1.12
COL7A1-206ENST00000466591 PTPRCP08575 1304 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 F8W031 263 aaPredicted RBP22.06■■□□□ 1.12
COL7A1-206ENST00000466591 SNAP23O00161 211 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 WNT10BO00744 389 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 MYO1BO43795 1136 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 KIF23Q02241 960 aaPredicted RBP22.06■■□□□ 1.12
COL7A1-206ENST00000466591 DLGAP5Q15398 846 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 EPHA10Q5JZY3 1008 aa22.06■■□□□ 1.12
COL7A1-206ENST00000466591 RBM5P52756 815 aaKnown RBP eCLIP22.05■■□□□ 1.12
COL7A1-206ENST00000466591 VPS37DQ86XT2 251 aa22.05■■□□□ 1.12
COL7A1-206ENST00000466591 PRAMEF18Q5VWM3 479 aa22.04■■□□□ 1.12
COL7A1-206ENST00000466591 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
COL7A1-206ENST00000466591 SUCLG2Q96I99 432 aa22.04■■□□□ 1.12
COL7A1-206ENST00000466591 ZNF521Q96K83 1311 aa22.04■■□□□ 1.12
COL7A1-206ENST00000466591 FRAT2O75474 233 aaPredicted RBP22.03■■□□□ 1.12
COL7A1-206ENST00000466591 NBPF7P0C2Y1 421 aaPredicted RBP22.03■■□□□ 1.12
COL7A1-206ENST00000466591 ZIC5Q96T25 663 aa22.03■■□□□ 1.12
COL7A1-206ENST00000466591 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
COL7A1-206ENST00000466591 JAG2Q9Y219 1238 aa22.03■■□□□ 1.12
COL7A1-206ENST00000466591 PAPPA2Q9BXP8 1791 aa22.02■■□□□ 1.12
COL7A1-206ENST00000466591 SLC10A3P09131 477 aa22.02■■□□□ 1.12
COL7A1-206ENST00000466591 PRKG1Q13976 671 aa22.02■■□□□ 1.12
COL7A1-206ENST00000466591 C15orf52Q6ZUT6 534 aaKnown RBP22.02■■□□□ 1.12
COL7A1-206ENST00000466591 ARMC9Q7Z3E5 817 aa22.02■■□□□ 1.12
COL7A1-206ENST00000466591 ABHD8Q96I13 439 aa22.02■■□□□ 1.12
COL7A1-206ENST00000466591 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
COL7A1-206ENST00000466591 FAM155AB1AL88 458 aaPredicted RBP22.01■■□□□ 1.11
COL7A1-206ENST00000466591 UBE2Q2LH0YL09 131 aa22.01■■□□□ 1.11
COL7A1-206ENST00000466591 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
COL7A1-206ENST00000466591 REM2Q8IYK8 340 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms