RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
CXCR4-203ENST00000466288 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.6
CXCR4-203ENST00000466288 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.6
CXCR4-203ENST00000466288 SPRYD7Q5W111 196 aa18.77■□□□□ 0.59
CXCR4-203ENST00000466288 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.59
CXCR4-203ENST00000466288 OGFOD1Q8N543 542 aa18.77■□□□□ 0.59
CXCR4-203ENST00000466288 MYD88Q99836 296 aa18.77■□□□□ 0.59
CXCR4-203ENST00000466288 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
CXCR4-203ENST00000466288 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
CXCR4-203ENST00000466288 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
CXCR4-203ENST00000466288 ARMC9Q7Z3E5 817 aa18.76■□□□□ 0.59
CXCR4-203ENST00000466288 PHAXQ9H814 394 aaKnown RBP18.76■□□□□ 0.59
CXCR4-203ENST00000466288 SASH1O94885 1247 aa18.75■□□□□ 0.59
CXCR4-203ENST00000466288 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
CXCR4-203ENST00000466288 PRKG1Q13976 671 aa18.75■□□□□ 0.59
CXCR4-203ENST00000466288 STRIP1Q5VSL9 837 aa18.75■□□□□ 0.59
CXCR4-203ENST00000466288 INTS3Q68E01 1043 aaKnown RBP18.75■□□□□ 0.59
CXCR4-203ENST00000466288 TRIM17Q9Y577 477 aa18.75■□□□□ 0.59
CXCR4-203ENST00000466288 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
CXCR4-203ENST00000466288 CWC25Q9NXE8 425 aaPredicted RBP18.74■□□□□ 0.59
CXCR4-203ENST00000466288 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
CXCR4-203ENST00000466288 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
CXCR4-203ENST00000466288 ANGEL1Q9UNK9 670 aaKnown RBP18.73■□□□□ 0.59
CXCR4-203ENST00000466288 MMP14P50281 582 aa18.72■□□□□ 0.59
CXCR4-203ENST00000466288 IFNL1Q8IU54 200 aa18.72■□□□□ 0.59
CXCR4-203ENST00000466288 APOBEC3FQ8IUX4 373 aaKnown RBP18.72■□□□□ 0.59
CXCR4-203ENST00000466288 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
CXCR4-203ENST00000466288 ZBED3Q96IU2 234 aaPredicted RBP18.72■□□□□ 0.59
CXCR4-203ENST00000466288 CDC5LQ99459 802 aaKnown RBP18.72■□□□□ 0.59
CXCR4-203ENST00000466288 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
CXCR4-203ENST00000466288 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
CXCR4-203ENST00000466288 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
CXCR4-203ENST00000466288 MANSC4A6NHS7 340 aaPredicted RBP18.71■□□□□ 0.59
CXCR4-203ENST00000466288 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
CXCR4-203ENST00000466288 INHBEP58166 350 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 COA1Q9GZY4 146 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 CTSWP56202 376 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
CXCR4-203ENST00000466288 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
CXCR4-203ENST00000466288 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
CXCR4-203ENST00000466288 MAP3K11Q16584 847 aa18.7■□□□□ 0.58
CXCR4-203ENST00000466288 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
CXCR4-203ENST00000466288 GREM2Q9H772 168 aa18.7■□□□□ 0.58
CXCR4-203ENST00000466288 ZNF646O15015 1829 aaPredicted RBP18.7■□□□□ 0.58
CXCR4-203ENST00000466288 SZT2Q5T011 3432 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 ZNF853P0CG23 659 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
CXCR4-203ENST00000466288 FXR1P51114 621 aaKnown RBP eCLIP18.69■□□□□ 0.58
CXCR4-203ENST00000466288 RALBP1Q15311 655 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 KIAA0825Q8IV33 1275 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 SLC10A4Q96EP9 437 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
CXCR4-203ENST00000466288 ARMC5Q96C12 935 aa18.68■□□□□ 0.58
CXCR4-203ENST00000466288 WNK4Q96J92 1243 aa18.68■□□□□ 0.58
CXCR4-203ENST00000466288 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
CXCR4-203ENST00000466288 KLRK1P26718 216 aa18.67■□□□□ 0.58
CXCR4-203ENST00000466288 ERO1AQ96HE7 468 aa18.67■□□□□ 0.58
CXCR4-203ENST00000466288 CLMNQ96JQ2 1002 aa18.67■□□□□ 0.58
CXCR4-203ENST00000466288 LEMD3Q9Y2U8 911 aa18.67■□□□□ 0.58
CXCR4-203ENST00000466288 COL1A1P02452 1464 aaPredicted RBP18.67■□□□□ 0.58
CXCR4-203ENST00000466288 SSC5DA1L4H1 1573 aa18.66■□□□□ 0.58
CXCR4-203ENST00000466288 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
CXCR4-203ENST00000466288 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
CXCR4-203ENST00000466288 CAP1Q01518 475 aa18.66■□□□□ 0.58
CXCR4-203ENST00000466288 CD99L2Q8TCZ2 262 aa18.66■□□□□ 0.58
CXCR4-203ENST00000466288 GTF2IP78347 998 aa18.65■□□□□ 0.58
CXCR4-203ENST00000466288 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.65■□□□□ 0.58
CXCR4-203ENST00000466288 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
CXCR4-203ENST00000466288 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
CXCR4-203ENST00000466288 PPP1R12BO60237 982 aaPredicted RBP18.65■□□□□ 0.58
CXCR4-203ENST00000466288 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
CXCR4-203ENST00000466288 CRHR2Q13324 411 aa18.65■□□□□ 0.58
CXCR4-203ENST00000466288 UNCXA6NJT0 531 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 GJA5P36382 358 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 MTMR14Q8NCE2 650 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 EFCC1Q9HA90 598 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
CXCR4-203ENST00000466288 DLGAP5Q15398 846 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 CERS5Q8N5B7 392 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 C8orf58Q8NAV2 365 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 PTPN18Q99952 460 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 PCDHAC2Q9Y5I4 1007 aa18.63■□□□□ 0.57
CXCR4-203ENST00000466288 TESPA1A2RU30 521 aaPredicted RBP18.62■□□□□ 0.57
CXCR4-203ENST00000466288 IGHMBP2P38935 993 aaKnown RBP18.62■□□□□ 0.57
CXCR4-203ENST00000466288 SP3Q02447 781 aa18.62■□□□□ 0.57
CXCR4-203ENST00000466288 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
CXCR4-203ENST00000466288 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
CXCR4-203ENST00000466288 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
CXCR4-203ENST00000466288 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.57
CXCR4-203ENST00000466288 OTUD7BQ6GQQ9 843 aa18.61■□□□□ 0.57
CXCR4-203ENST00000466288 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
CXCR4-203ENST00000466288 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
CXCR4-203ENST00000466288 ANKRD2Q9GZV1 360 aa18.61■□□□□ 0.57
CXCR4-203ENST00000466288 COLQQ9Y215 455 aaPredicted RBP18.61■□□□□ 0.57
CXCR4-203ENST00000466288 RBBP6Q7Z6E9 1792 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms