RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
CD40-204ENST00000466205 H7C1D1 291 aa12.77□□□□□ -0.37
CD40-204ENST00000466205 EGFRP00533 1210 aa12.77□□□□□ -0.37
CD40-204ENST00000466205 HIRAP54198 1017 aaPredicted RBP12.77□□□□□ -0.37
CD40-204ENST00000466205 USP50Q70EL3 339 aaPredicted RBP12.77□□□□□ -0.37
CD40-204ENST00000466205 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.37
CD40-204ENST00000466205 TRAF5O00463 557 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
CD40-204ENST00000466205 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
CD40-204ENST00000466205 ZKSCAN2Q63HK3 967 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 RSBN1LQ6PCB5 846 aaPredicted RBP12.76□□□□□ -0.37
CD40-204ENST00000466205 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 ARHGAP45Q92619 1136 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 COA1Q9GZY4 146 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 SIL1Q9H173 461 aa12.76□□□□□ -0.37
CD40-204ENST00000466205 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
CD40-204ENST00000466205 GTF2IP78347 998 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
CD40-204ENST00000466205 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
CD40-204ENST00000466205 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 PASKQ96RG2 1323 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 RPS12P25398 132 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 GYG1P46976 350 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 DPF2Q92785 391 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 ZNF408Q9H9D4 720 aa12.74□□□□□ -0.37
CD40-204ENST00000466205 MKRN1Q9UHC7 482 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
CD40-204ENST00000466205 MROH5Q6ZUA9 1318 aa12.73□□□□□ -0.37
CD40-204ENST00000466205 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
CD40-204ENST00000466205 DACT2Q5SW24 774 aa12.73□□□□□ -0.37
CD40-204ENST00000466205 TTLL5Q6EMB2 1281 aa12.73□□□□□ -0.37
CD40-204ENST00000466205 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
CD40-204ENST00000466205 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
CD40-204ENST00000466205 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
CD40-204ENST00000466205 USP17L8P0C7I0 530 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 RLBP1P12271 317 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 DNAJC5GQ8N7S2 189 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
CD40-204ENST00000466205 PSME4Q14997 1843 aa12.72□□□□□ -0.37
CD40-204ENST00000466205 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 EYA2O00167 538 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 GNAI3P08754 354 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
CD40-204ENST00000466205 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 KLRG1Q96E93 195 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 GMLQ99445 158 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 GGA3Q9NZ52 723 aa12.71□□□□□ -0.37
CD40-204ENST00000466205 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.37
CD40-204ENST00000466205 ZNF646O15015 1829 aaPredicted RBP12.71□□□□□ -0.38
CD40-204ENST00000466205 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 SASH1O94885 1247 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 PDE8BO95263 885 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 SCARF1Q14162 830 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 C15orf52Q6ZUT6 534 aaKnown RBP12.7□□□□□ -0.38
CD40-204ENST00000466205 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
CD40-204ENST00000466205 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 GNAI2P04899 355 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 IL1R1P14778 569 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 HIBADHP31937 336 aaKnown RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 GRM1Q13255 1194 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 DCPSQ96C86 337 aaKnown RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
CD40-204ENST00000466205 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
CD40-204ENST00000466205 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
CD40-204ENST00000466205 BCAMP50895 628 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms