RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
PTPRU-206ENST00000465525 ZNF804BA4D1E1 1349 aa21.07■□□□□ 0.96
PTPRU-206ENST00000465525 MAP4K4O95819 1239 aaPredicted RBP21.06■□□□□ 0.96
PTPRU-206ENST00000465525 IFIT1P09914 478 aaKnown RBP21.06■□□□□ 0.96
PTPRU-206ENST00000465525 TTC22Q5TAA0 569 aa21.06■□□□□ 0.96
PTPRU-206ENST00000465525 PI4K2BQ8TCG2 481 aa21.06■□□□□ 0.96
PTPRU-206ENST00000465525 PODXL2Q9NZ53 605 aa21.06■□□□□ 0.96
PTPRU-206ENST00000465525 DUOX1Q9NRD9 1551 aa21.06■□□□□ 0.96
PTPRU-206ENST00000465525 UFL1O94874 794 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
PTPRU-206ENST00000465525 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 CCDC93Q567U6 631 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 MPNDQ8N594 471 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 AK9Q5TCS8 1911 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 PHKA1P46020 1223 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 GYG1P46976 350 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 RTKN2Q8IZC4 609 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 OSBPL3Q9H4L5 887 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 NDUFB9Q9Y6M9 179 aa21.05■□□□□ 0.96
PTPRU-206ENST00000465525 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 BCAMP50895 628 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 DPP8Q6V1X1 898 aaPredicted RBP21.04■□□□□ 0.96
PTPRU-206ENST00000465525 TXNRD3Q86VQ6 643 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 BOLA2Q9H3K6 86 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 POLLQ9UGP5 575 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 GGA1Q9UJY5 639 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 LEMD3Q9Y2U8 911 aa21.04■□□□□ 0.96
PTPRU-206ENST00000465525 C6orf229H3BNL8 230 aa21.03■□□□□ 0.96
PTPRU-206ENST00000465525 TTC39AQ5SRH9 613 aa21.03■□□□□ 0.96
PTPRU-206ENST00000465525 TBC1D16Q8TBP0 767 aa21.03■□□□□ 0.96
PTPRU-206ENST00000465525 AOX1Q06278 1338 aa21.03■□□□□ 0.96
PTPRU-206ENST00000465525 ATP2B4P23634 1241 aa21.02■□□□□ 0.96
PTPRU-206ENST00000465525 CCDC158Q5M9N0 1113 aa21.02■□□□□ 0.96
PTPRU-206ENST00000465525 CCDC102BQ68D86 513 aa21.02■□□□□ 0.96
PTPRU-206ENST00000465525 GOLGB1Q14789 3259 aaKnown RBP21.02■□□□□ 0.96
PTPRU-206ENST00000465525 SCARF1Q14162 830 aa21.02■□□□□ 0.95
PTPRU-206ENST00000465525 IQSEC3Q9UPP2 1182 aaPredicted RBP21.02■□□□□ 0.95
PTPRU-206ENST00000465525 AKAP11Q9UKA4 1901 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 MYH13Q9UKX3 1938 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 ERC2O15083 957 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 GLRX3O76003 335 aaKnown RBP21.01■□□□□ 0.95
PTPRU-206ENST00000465525 ATP5JP18859 108 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 IRS2Q9Y4H2 1338 aa21.01■□□□□ 0.95
PTPRU-206ENST00000465525 PI16Q6UXB8 463 aa21■□□□□ 0.95
PTPRU-206ENST00000465525 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
PTPRU-206ENST00000465525 EDC3Q96F86 508 aaKnown RBP21■□□□□ 0.95
PTPRU-206ENST00000465525 FAM84BQ96KN1 310 aaPredicted RBP21■□□□□ 0.95
PTPRU-206ENST00000465525 DNAJC2Q99543 621 aaKnown RBP21■□□□□ 0.95
PTPRU-206ENST00000465525 RTFDC1Q9BY42 306 aaPredicted RBP21■□□□□ 0.95
PTPRU-206ENST00000465525 SNED1Q8TER0 1413 aa21■□□□□ 0.95
PTPRU-206ENST00000465525 ARFGEF1Q9Y6D6 1849 aa21■□□□□ 0.95
PTPRU-206ENST00000465525 TRIM6-TRIM34B2RNG4 842 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 RIMBP2O15034 1052 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 SUPT20HQ8NEM7 779 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 PSMD1Q99460 953 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 SDSP20132 328 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 GPR162Q16538 588 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 VPS37DQ86XT2 251 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 RILPL2Q969X0 211 aa20.99■□□□□ 0.95
PTPRU-206ENST00000465525 MYO5AQ9Y4I1 1855 aaKnown RBP20.98■□□□□ 0.95
PTPRU-206ENST00000465525 YBX3P16989 372 aaKnown RBP eCLIP20.98■□□□□ 0.95
PTPRU-206ENST00000465525 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
PTPRU-206ENST00000465525 EYA3Q99504 573 aa20.98■□□□□ 0.95
PTPRU-206ENST00000465525 MCAMP43121 646 aa20.97■□□□□ 0.95
PTPRU-206ENST00000465525 ARID4AP29374 1257 aaPredicted RBP20.96■□□□□ 0.95
PTPRU-206ENST00000465525 HIBADHP31937 336 aaKnown RBP20.96■□□□□ 0.95
PTPRU-206ENST00000465525 RASGRF1Q13972 1273 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 FBXO33Q7Z6M2 555 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 HAUS7Q99871 368 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 MED23Q9ULK4 1368 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 UQCRFS1P1P0C7P4 283 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 ZAP70P43403 619 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 WASHC4Q2M389 1173 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 C15orf52Q6ZUT6 534 aaKnown RBP20.96■□□□□ 0.95
PTPRU-206ENST00000465525 ZC3H12CQ9C0D7 883 aaKnown RBP20.96■□□□□ 0.95
PTPRU-206ENST00000465525 VPS33BQ9H267 617 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 TAOK3Q9H2K8 898 aa20.96■□□□□ 0.95
PTPRU-206ENST00000465525 COL1A1P02452 1464 aaPredicted RBP20.95■□□□□ 0.94
PTPRU-206ENST00000465525 LTBP3Q9NS15 1303 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 CHD4Q14839 1912 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 NFKBIEO00221 500 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 GOLIM4O00461 696 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 HMG20BQ9P0W2 317 aa20.95■□□□□ 0.94
PTPRU-206ENST00000465525 ZNF804AQ7Z570 1209 aa20.94■□□□□ 0.94
PTPRU-206ENST00000465525 ANTXR1Q9H6X2 564 aa20.94■□□□□ 0.94
PTPRU-206ENST00000465525 GNL3LQ9NVN8 582 aaKnown RBP20.94■□□□□ 0.94
PTPRU-206ENST00000465525 JAG2Q9Y219 1238 aa20.94■□□□□ 0.94
PTPRU-206ENST00000465525 DOK7Q18PE1 504 aa20.93■□□□□ 0.94
PTPRU-206ENST00000465525 SPATA5Q8NB90 893 aa20.93■□□□□ 0.94
PTPRU-206ENST00000465525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.93■□□□□ 0.94
PTPRU-206ENST00000465525 ZNF512BQ96KM6 892 aaPredicted RBP20.93■□□□□ 0.94
PTPRU-206ENST00000465525 PAG1Q9NWQ8 432 aa20.93■□□□□ 0.94
PTPRU-206ENST00000465525 FRAT2O75474 233 aaPredicted RBP20.93■□□□□ 0.94
PTPRU-206ENST00000465525 AOC3Q16853 763 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms