RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 CAVIN4Q5BKX8 364 aa26.36■■□□□ 1.81
ITGA4-204ENST00000465522 SLC51AQ86UW1 340 aa26.36■■□□□ 1.81
ITGA4-204ENST00000465522 TMX4Q9H1E5 349 aaPredicted RBP26.36■■□□□ 1.81
ITGA4-204ENST00000465522 GPSM2P81274 684 aa26.36■■□□□ 1.81
ITGA4-204ENST00000465522 FKBP4Q02790 459 aaKnown RBP eCLIP26.36■■□□□ 1.81
ITGA4-204ENST00000465522 CNKSR1Q969H4 720 aa26.36■■□□□ 1.81
ITGA4-204ENST00000465522 EDC3Q96F86 508 aaKnown RBP26.36■■□□□ 1.81
ITGA4-204ENST00000465522 PAG1Q9NWQ8 432 aa26.36■■□□□ 1.81
ITGA4-204ENST00000465522 CHMLP26374 656 aa26.35■■□□□ 1.81
ITGA4-204ENST00000465522 ARID4AP29374 1257 aaPredicted RBP26.35■■□□□ 1.81
ITGA4-204ENST00000465522 SNRKQ9NRH2 765 aa26.35■■□□□ 1.81
ITGA4-204ENST00000465522 SCARF1Q14162 830 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 VPS37DQ86XT2 251 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 FSD1Q9BTV5 496 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 GOLIM4O00461 696 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 MCAMP43121 646 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 GYG1P46976 350 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 PODXL2Q9NZ53 605 aa26.34■■□□□ 1.81
ITGA4-204ENST00000465522 CACNA1SQ13698 1873 aa26.33■■□□□ 1.81
ITGA4-204ENST00000465522 EIF5BO60841 1220 aaKnown RBP26.33■■□□□ 1.81
ITGA4-204ENST00000465522 ATP2B4P23634 1241 aa26.33■■□□□ 1.81
ITGA4-204ENST00000465522 FAM84BQ96KN1 310 aaPredicted RBP26.33■■□□□ 1.81
ITGA4-204ENST00000465522 GNL3LQ9NVN8 582 aaKnown RBP26.33■■□□□ 1.81
ITGA4-204ENST00000465522 GGA1Q9UJY5 639 aa26.33■■□□□ 1.81
ITGA4-204ENST00000465522 AKAP11Q9UKA4 1901 aa26.32■■□□□ 1.8
ITGA4-204ENST00000465522 ZAP70P43403 619 aa26.32■■□□□ 1.8
ITGA4-204ENST00000465522 MFAP1P55081 439 aaKnown RBP26.32■■□□□ 1.8
ITGA4-204ENST00000465522 PRPF40BQ6NWY9 871 aaKnown RBP26.32■■□□□ 1.8
ITGA4-204ENST00000465522 UPF2Q9HAU5 1272 aaKnown RBP26.32■■□□□ 1.8
ITGA4-204ENST00000465522 HIP1O00291 1037 aa26.31■■□□□ 1.8
ITGA4-204ENST00000465522 UFL1O94874 794 aa26.31■■□□□ 1.8
ITGA4-204ENST00000465522 KLRK1P26718 216 aa26.31■■□□□ 1.8
ITGA4-204ENST00000465522 SGIP1Q9BQI5 828 aa26.31■■□□□ 1.8
ITGA4-204ENST00000465522 DIAPH3Q9NSV4 1193 aa26.31■■□□□ 1.8
ITGA4-204ENST00000465522 KIF13BQ9NQT8 1826 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 LRRC37AA6NMS7 1700 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 A0A0G2JLW4 131 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 HIBADHP31937 336 aaKnown RBP26.3■■□□□ 1.8
ITGA4-204ENST00000465522 PI16Q6UXB8 463 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 FBXO33Q7Z6M2 555 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 KBTBD3Q8NAB2 608 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 HMG20BQ9P0W2 317 aa26.3■■□□□ 1.8
ITGA4-204ENST00000465522 SLX4Q8IY92 1834 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 TGFB2P61812 414 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 RASGRF1Q13972 1273 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 MPNDQ8N594 471 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 SPATA5Q8NB90 893 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 ANTXR1Q9H6X2 564 aa26.29■■□□□ 1.8
ITGA4-204ENST00000465522 RBM19Q9Y4C8 960 aaKnown RBP26.29■■□□□ 1.8
ITGA4-204ENST00000465522 DPEP1P16444 411 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 OLFM4Q6UX06 510 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 TXNRD3Q86VQ6 643 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 TBC1D16Q8TBP0 767 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 ESYT1Q9BSJ8 1104 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 C6orf229H3BNL8 230 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 TTLL6Q8N841 843 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 PPP1R1BQ9UD71 204 aaPredicted RBP26.28■■□□□ 1.8
ITGA4-204ENST00000465522 POLLQ9UGP5 575 aa26.28■■□□□ 1.8
ITGA4-204ENST00000465522 PTGER2P43116 358 aa26.27■■□□□ 1.8
ITGA4-204ENST00000465522 TTF1Q15361 905 aaPredicted RBP26.27■■□□□ 1.8
ITGA4-204ENST00000465522 CWC27Q6UX04 472 aaKnown RBP26.27■■□□□ 1.8
ITGA4-204ENST00000465522 DPP8Q6V1X1 898 aaPredicted RBP26.27■■□□□ 1.8
ITGA4-204ENST00000465522 C15orf52Q6ZUT6 534 aaKnown RBP26.27■■□□□ 1.8
ITGA4-204ENST00000465522 RUFY2Q8WXA3 655 aa26.27■■□□□ 1.8
ITGA4-204ENST00000465522 IQSEC3Q9UPP2 1182 aaPredicted RBP26.27■■□□□ 1.8
ITGA4-204ENST00000465522 IRS2Q9Y4H2 1338 aa26.27■■□□□ 1.8
ITGA4-204ENST00000465522 FRAT2O75474 233 aaPredicted RBP26.26■■□□□ 1.79
ITGA4-204ENST00000465522 CYP2E1P05181 493 aaPredicted RBP26.26■■□□□ 1.79
ITGA4-204ENST00000465522 KCNA3P22001 575 aa26.26■■□□□ 1.79
ITGA4-204ENST00000465522 TICAM2Q86XR7 235 aa26.26■■□□□ 1.79
ITGA4-204ENST00000465522 ZNF219Q9P2Y4 722 aaPredicted RBP26.26■■□□□ 1.79
ITGA4-204ENST00000465522 DLEC1Q9Y238 1755 aa26.25■■□□□ 1.79
ITGA4-204ENST00000465522 GPR101Q96P66 508 aaPredicted RBP26.25■■□□□ 1.79
ITGA4-204ENST00000465522 LRRFIP1Q32MZ4 808 aaKnown RBP26.25■■□□□ 1.79
ITGA4-204ENST00000465522 SEMA3EO15041 775 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 REC8O95072 547 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 ZNF804AQ7Z570 1209 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 C7orf43Q8WVR3 580 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 DENND2AQ9ULE3 1009 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 RFX7Q2KHR2 1363 aa26.24■■□□□ 1.79
ITGA4-204ENST00000465522 KLHL34Q8N239 644 aa26.23■■□□□ 1.79
ITGA4-204ENST00000465522 SPON1Q9HCB6 807 aa26.23■■□□□ 1.79
ITGA4-204ENST00000465522 CD2APQ9Y5K6 639 aa26.23■■□□□ 1.79
ITGA4-204ENST00000465522 LTBP1Q14766 1721 aa26.23■■□□□ 1.79
ITGA4-204ENST00000465522 NMIQ13287 307 aaPredicted RBP26.22■■□□□ 1.79
ITGA4-204ENST00000465522 CC2D2BQ6DHV5 1058 aa26.22■■□□□ 1.79
ITGA4-204ENST00000465522 SGSM2O43147 1006 aa26.22■■□□□ 1.79
ITGA4-204ENST00000465522 FAM227BQ96M60 508 aa26.22■■□□□ 1.79
ITGA4-204ENST00000465522 PIM2Q9P1W9 311 aa26.22■■□□□ 1.79
ITGA4-204ENST00000465522 ZC3H12CQ9C0D7 883 aaKnown RBP26.21■■□□□ 1.79
ITGA4-204ENST00000465522 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.21■■□□□ 1.79
ITGA4-204ENST00000465522 PIH1D3Q9NQM4 214 aaKnown RBP26.21■■□□□ 1.79
ITGA4-204ENST00000465522 MED23Q9ULK4 1368 aa26.21■■□□□ 1.79
ITGA4-204ENST00000465522 RNF113AO15541 343 aaKnown RBP26.2■■□□□ 1.79
ITGA4-204ENST00000465522 C21orf2O43822 256 aa26.2■■□□□ 1.79
ITGA4-204ENST00000465522 WASHC4Q2M389 1173 aa26.2■■□□□ 1.79
ITGA4-204ENST00000465522 MYH13Q9UKX3 1938 aa26.2■■□□□ 1.78
ITGA4-204ENST00000465522 IDH1O75874 414 aaKnown RBP26.19■■□□□ 1.78
ITGA4-204ENST00000465522 ZSCAN25Q6NSZ9 544 aa26.19■■□□□ 1.78
ITGA4-204ENST00000465522 C22orf23Q9BZE7 217 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms