RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LDLRAD1Q5T700 205 aa19.64■□□□□ 0.73
HDAC6-214ENST00000465269 JARID2Q92833 1246 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-214ENST00000465269 FBXW7Q969H0 707 aa19.64■□□□□ 0.73
HDAC6-214ENST00000465269 ARMC9Q7Z3E5 817 aa19.63■□□□□ 0.73
HDAC6-214ENST00000465269 OTUD5Q96G74 571 aa19.63■□□□□ 0.73
HDAC6-214ENST00000465269 CRHR2Q13324 411 aa19.62■□□□□ 0.73
HDAC6-214ENST00000465269 CHRDL2Q6WN34 429 aa19.62■□□□□ 0.73
HDAC6-214ENST00000465269 LAMA3Q16787 3333 aa19.61■□□□□ 0.73
HDAC6-214ENST00000465269 ALDH1A1P00352 501 aa19.61■□□□□ 0.73
HDAC6-214ENST00000465269 DACT2Q5SW24 774 aa19.61■□□□□ 0.73
HDAC6-214ENST00000465269 PLBD2Q8NHP8 589 aa19.61■□□□□ 0.73
HDAC6-214ENST00000465269 EFCC1Q9HA90 598 aa19.61■□□□□ 0.73
HDAC6-214ENST00000465269 ZNF646O15015 1829 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-214ENST00000465269 ANKRD13DQ6ZTN6 518 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 SLC17A8Q8NDX2 589 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 SLC10A4Q96EP9 437 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 ERO1AQ96HE7 468 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 WNK4Q96J92 1243 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 ZNF333Q96JL9 665 aa19.6■□□□□ 0.73
HDAC6-214ENST00000465269 MANSC4A6NHS7 340 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-214ENST00000465269 GJA5P36382 358 aa19.59■□□□□ 0.73
HDAC6-214ENST00000465269 TMEM106CQ9BVX2 250 aa19.59■□□□□ 0.73
HDAC6-214ENST00000465269 SSC5DA1L4H1 1573 aa19.58■□□□□ 0.73
HDAC6-214ENST00000465269 PODNQ7Z5L7 613 aa19.58■□□□□ 0.72
HDAC6-214ENST00000465269 PTCH2Q9Y6C5 1203 aa19.58■□□□□ 0.72
HDAC6-214ENST00000465269 XDHP47989 1333 aa19.57■□□□□ 0.72
HDAC6-214ENST00000465269 MAPK8IP3Q9UPT6 1336 aa19.57■□□□□ 0.72
HDAC6-214ENST00000465269 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
HDAC6-214ENST00000465269 PTPN18Q99952 460 aa19.57■□□□□ 0.72
HDAC6-214ENST00000465269 RBM27Q9P2N5 1060 aaKnown RBP19.57■□□□□ 0.72
HDAC6-214ENST00000465269 RIPK4P57078 832 aa19.56■□□□□ 0.72
HDAC6-214ENST00000465269 SLC4A8Q2Y0W8 1093 aa19.56■□□□□ 0.72
HDAC6-214ENST00000465269 TXNRD3Q86VQ6 643 aa19.56■□□□□ 0.72
HDAC6-214ENST00000465269 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
HDAC6-214ENST00000465269 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
HDAC6-214ENST00000465269 SP3Q02447 781 aa19.55■□□□□ 0.72
HDAC6-214ENST00000465269 ATP2B4P23634 1241 aa19.54■□□□□ 0.72
HDAC6-214ENST00000465269 INHBEP58166 350 aa19.54■□□□□ 0.72
HDAC6-214ENST00000465269 SLC9C1Q4G0N8 1177 aa19.54■□□□□ 0.72
HDAC6-214ENST00000465269 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
HDAC6-214ENST00000465269 APOBEC3FQ8IUX4 373 aaKnown RBP19.54■□□□□ 0.72
HDAC6-214ENST00000465269 DEFB129Q9H1M3 183 aa19.54■□□□□ 0.72
HDAC6-214ENST00000465269 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
HDAC6-214ENST00000465269 KLRK1P26718 216 aa19.53■□□□□ 0.72
HDAC6-214ENST00000465269 CCDC152Q4G0S7 254 aa19.53■□□□□ 0.72
HDAC6-214ENST00000465269 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-214ENST00000465269 SH3TC2Q8TF17 1288 aa19.53■□□□□ 0.72
HDAC6-214ENST00000465269 ZBED3Q96IU2 234 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-214ENST00000465269 AOX1Q06278 1338 aa19.52■□□□□ 0.72
HDAC6-214ENST00000465269 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-214ENST00000465269 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
HDAC6-214ENST00000465269 ZSWIM8A7E2V4 1837 aa19.52■□□□□ 0.72
HDAC6-214ENST00000465269 SPEF2Q9C093 1822 aa19.51■□□□□ 0.71
HDAC6-214ENST00000465269 ECM2O94769 699 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-214ENST00000465269 TRIM28Q13263 835 aaKnown RBP19.51■□□□□ 0.71
HDAC6-214ENST00000465269 STRIP1Q5VSL9 837 aa19.51■□□□□ 0.71
HDAC6-214ENST00000465269 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-214ENST00000465269 MYD88Q99836 296 aa19.51■□□□□ 0.71
HDAC6-214ENST00000465269 MED23Q9ULK4 1368 aa19.51■□□□□ 0.71
HDAC6-214ENST00000465269 CLRN2A0PK11 232 aa19.5■□□□□ 0.71
HDAC6-214ENST00000465269 NBPF12Q5TAG4 269 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-214ENST00000465269 ARHGAP39Q9C0H5 1083 aa19.5■□□□□ 0.71
HDAC6-214ENST00000465269 UNC80Q8N2C7 3258 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 LAMB1P07942 1786 aa19.49■□□□□ 0.71
HDAC6-214ENST00000465269 PDE8AO60658 829 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 CCT4P50991 539 aaKnown RBP19.48■□□□□ 0.71
HDAC6-214ENST00000465269 GTF2IP78347 998 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 DPF3Q92784 378 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
HDAC6-214ENST00000465269 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 BABAM1Q9NWV8 329 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-214ENST00000465269 MYO3BQ8WXR4 1341 aa19.48■□□□□ 0.71
HDAC6-214ENST00000465269 CHL1O00533 1208 aa19.47■□□□□ 0.71
HDAC6-214ENST00000465269 PPP1R12BO60237 982 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-214ENST00000465269 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
HDAC6-214ENST00000465269 OTUD7BQ6GQQ9 843 aa19.47■□□□□ 0.71
HDAC6-214ENST00000465269 NBPF11Q86T75 865 aa19.47■□□□□ 0.71
HDAC6-214ENST00000465269 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
HDAC6-214ENST00000465269 USP2O75604 605 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-214ENST00000465269 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-214ENST00000465269 DLGAP5Q15398 846 aa19.46■□□□□ 0.71
HDAC6-214ENST00000465269 CERS5Q8N5B7 392 aa19.46■□□□□ 0.71
HDAC6-214ENST00000465269 BRI3BPQ8WY22 251 aa19.46■□□□□ 0.71
HDAC6-214ENST00000465269 COA1Q9GZY4 146 aa19.46■□□□□ 0.71
HDAC6-214ENST00000465269 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-214ENST00000465269 SOX1O00570 391 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-214ENST00000465269 MTFR1Q15390 333 aa19.45■□□□□ 0.7
HDAC6-214ENST00000465269 MS4A4AQ96JQ5 239 aa19.45■□□□□ 0.7
HDAC6-214ENST00000465269 GREM2Q9H772 168 aa19.45■□□□□ 0.7
HDAC6-214ENST00000465269 VEZTQ9HBM0 779 aa19.45■□□□□ 0.7
HDAC6-214ENST00000465269 HYPKQ9NX55 129 aa19.45■□□□□ 0.7
HDAC6-214ENST00000465269 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
HDAC6-214ENST00000465269 TESPA1A2RU30 521 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms