RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CHMP4BQ9H444 224 aaKnown RBP21.94■■□□□ 1.1
CPSF4-209ENST00000465132 G3V3G9 751 aa21.93■■□□□ 1.1
CPSF4-209ENST00000465132 KIF4BQ2VIQ3 1234 aa21.93■■□□□ 1.1
CPSF4-209ENST00000465132 DCAF8Q5TAQ9 597 aa21.93■■□□□ 1.1
CPSF4-209ENST00000465132 DCPSQ96C86 337 aaKnown RBP21.93■■□□□ 1.1
CPSF4-209ENST00000465132 ADM5C9JUS6 153 aa21.92■■□□□ 1.1
CPSF4-209ENST00000465132 NOGQ13253 232 aa21.92■■□□□ 1.1
CPSF4-209ENST00000465132 ANKRD18AQ8IVF6 992 aa21.92■■□□□ 1.1
CPSF4-209ENST00000465132 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
CPSF4-209ENST00000465132 SCN9AQ15858 1988 aa21.91■■□□□ 1.1
CPSF4-209ENST00000465132 TRIM27P14373 513 aa21.91■■□□□ 1.1
CPSF4-209ENST00000465132 PDE3AQ14432 1141 aa21.91■■□□□ 1.1
CPSF4-209ENST00000465132 GBA2Q9HCG7 927 aaPredicted RBP21.91■■□□□ 1.1
CPSF4-209ENST00000465132 XDHP47989 1333 aa21.9■■□□□ 1.1
CPSF4-209ENST00000465132 IGKV5-2P06315 115 aa21.9■■□□□ 1.1
CPSF4-209ENST00000465132 ZIC5Q96T25 663 aa21.9■■□□□ 1.1
CPSF4-209ENST00000465132 ZNF609O15014 1411 aa21.89■■□□□ 1.1
CPSF4-209ENST00000465132 F6X3S4 739 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 CTSWP56202 376 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 BEND3Q5T5X7 828 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 RGMBQ6NW40 437 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 RSBN1LQ6PCB5 846 aaPredicted RBP21.89■■□□□ 1.09
CPSF4-209ENST00000465132 C2orf69Q8N8R5 385 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 AGBL3Q8NEM8 1001 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 GGA3Q9NZ52 723 aa21.89■■□□□ 1.09
CPSF4-209ENST00000465132 ASTN2O75129 1339 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-209ENST00000465132 NEURL1BA8MQ27 555 aa21.88■■□□□ 1.09
CPSF4-209ENST00000465132 ATP2B4P23634 1241 aa21.88■■□□□ 1.09
CPSF4-209ENST00000465132 ZNF280AP59817 542 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-209ENST00000465132 INTS3Q68E01 1043 aaKnown RBP21.88■■□□□ 1.09
CPSF4-209ENST00000465132 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
CPSF4-209ENST00000465132 TTLL11Q8NHH1 800 aa21.88■■□□□ 1.09
CPSF4-209ENST00000465132 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
CPSF4-209ENST00000465132 C9orf78Q9NZ63 289 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-209ENST00000465132 FAM155AB1AL88 458 aaPredicted RBP21.87■■□□□ 1.09
CPSF4-209ENST00000465132 RRP1P56182 461 aaKnown RBP21.87■■□□□ 1.09
CPSF4-209ENST00000465132 GMLQ99445 158 aa21.87■■□□□ 1.09
CPSF4-209ENST00000465132 PODNQ7Z5L7 613 aa21.86■■□□□ 1.09
CPSF4-209ENST00000465132 CCDC102AQ96A19 550 aa21.86■■□□□ 1.09
CPSF4-209ENST00000465132 WTIPA6NIX2 430 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-209ENST00000465132 SCARF1Q14162 830 aa21.85■■□□□ 1.09
CPSF4-209ENST00000465132 GCKRQ14397 625 aa21.85■■□□□ 1.09
CPSF4-209ENST00000465132 CWF19L2Q2TBE0 894 aaKnown RBP21.85■■□□□ 1.09
CPSF4-209ENST00000465132 CLUAP1Q96AJ1 413 aa21.85■■□□□ 1.09
CPSF4-209ENST00000465132 GREM2Q9H772 168 aa21.85■■□□□ 1.09
CPSF4-209ENST00000465132 BSDC1Q9NW68 430 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-209ENST00000465132 MINPP1Q9UNW1 487 aa21.85■■□□□ 1.09
CPSF4-209ENST00000465132 POLR2AP24928 1970 aaKnown RBP21.85■■□□□ 1.09
CPSF4-209ENST00000465132 USP17L3A6NCW0 530 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 USP17L4A6NCW7 530 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 CCDC85CA6NKD9 419 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 USP17L8P0C7I0 530 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 ZNF157P51786 506 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-209ENST00000465132 ANGEL2Q5VTE6 544 aaKnown RBP21.84■■□□□ 1.09
CPSF4-209ENST00000465132 USP17L1Q7RTZ2 530 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 CDCA5Q96FF9 252 aa21.84■■□□□ 1.09
CPSF4-209ENST00000465132 GNAI3P08754 354 aa21.83■■□□□ 1.09
CPSF4-209ENST00000465132 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
CPSF4-209ENST00000465132 MYOZ2Q9NPC6 264 aa21.83■■□□□ 1.09
CPSF4-209ENST00000465132 MED23Q9ULK4 1368 aa21.83■■□□□ 1.08
CPSF4-209ENST00000465132 H7C1W4 665 aa21.82■■□□□ 1.08
CPSF4-209ENST00000465132 GRM8O00222 908 aa21.82■■□□□ 1.08
CPSF4-209ENST00000465132 KIF23Q02241 960 aaPredicted RBP21.82■■□□□ 1.08
CPSF4-209ENST00000465132 UBE3BQ7Z3V4 1068 aa21.82■■□□□ 1.08
CPSF4-209ENST00000465132 ITPRIPQ8IWB1 547 aa21.82■■□□□ 1.08
CPSF4-209ENST00000465132 DDX19BQ9UMR2 479 aa21.82■■□□□ 1.08
CPSF4-209ENST00000465132 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
CPSF4-209ENST00000465132 PSME4Q14997 1843 aa21.81■■□□□ 1.08
CPSF4-209ENST00000465132 SAGE1Q9NXZ1 904 aa21.81■■□□□ 1.08
CPSF4-209ENST00000465132 PLIN1O60240 522 aa21.8■■□□□ 1.08
CPSF4-209ENST00000465132 SLC10A3P09131 477 aa21.8■■□□□ 1.08
CPSF4-209ENST00000465132 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
CPSF4-209ENST00000465132 PITPNM2Q9BZ72 1349 aa21.8■■□□□ 1.08
CPSF4-209ENST00000465132 UBTFL1P0CB47 393 aaPredicted RBP21.79■■□□□ 1.08
CPSF4-209ENST00000465132 AAMPQ13685 434 aa21.79■■□□□ 1.08
CPSF4-209ENST00000465132 MVPQ14764 893 aaKnown RBP21.79■■□□□ 1.08
CPSF4-209ENST00000465132 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
CPSF4-209ENST00000465132 DACT2Q5SW24 774 aa21.79■■□□□ 1.08
CPSF4-209ENST00000465132 CASP8AP2Q9UKL3 1982 aa21.79■■□□□ 1.08
CPSF4-209ENST00000465132 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
CPSF4-209ENST00000465132 FKBP1BP68106 108 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 DGKZQ13574 1117 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 PLA2G12BQ9BX93 195 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 COA1Q9GZY4 146 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 LEMD3Q9Y2U8 911 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 UTYO14607 1347 aa21.78■■□□□ 1.08
CPSF4-209ENST00000465132 RGS19P49795 217 aa21.77■■□□□ 1.08
CPSF4-209ENST00000465132 PANK1Q8TE04 598 aa21.77■■□□□ 1.08
CPSF4-209ENST00000465132 MXD3Q9BW11 206 aa21.77■■□□□ 1.08
CPSF4-209ENST00000465132 RNF186Q9NXI6 227 aa21.77■■□□□ 1.08
CPSF4-209ENST00000465132 MYH3P11055 1940 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 TRPA1O75762 1119 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 ITGA6P23229 1130 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 CASP7P55210 303 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 NBPF9Q3BBW0 867 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 STRIP1Q5VSL9 837 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 TXNRD3Q86VQ6 643 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 FBXW7Q969H0 707 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 CSRNP1Q96S65 589 aa21.76■■□□□ 1.07
CPSF4-209ENST00000465132 SCAF8Q9UPN6 1271 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms