RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ITGA6P23229 1130 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 FOSBP53539 338 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 CCT2P78371 535 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 TTLL11Q8NHH1 800 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 USP25Q9UHP3 1055 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 AKAP2Q9Y2D5 859 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 MYH15Q9Y2K3 1946 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 LETM1O95202 739 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 CERKQ8TCT0 537 aa22.11■■□□□ 1.13
TSPAN4-210ENST00000464987 PFKFB2O60825 505 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 NCOA5Q9HCD5 579 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 RIPOR2Q9Y4F9 1068 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 HMGB1P09429 215 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 PDIA4P13667 645 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 HAND2P61296 217 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 WASHC4Q2M389 1173 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 MPNDQ8N594 471 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 NSUN7Q8NE18 718 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 SMARCC2Q8TAQ2 1214 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 PUS7LQ9H0K6 701 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 FBXO3Q9UK99 471 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 TBC1D2BQ9UPU7 963 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 ELP1O95163 1332 aa22.1■■□□□ 1.13
TSPAN4-210ENST00000464987 COL14A1Q05707 1796 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 RESTQ13127 1097 aa22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 LDHAL6AQ6ZMR3 332 aa22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 FAM184AQ8NB25 1140 aa22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 LEO1Q8WVC0 666 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 SPATA32Q96LK8 384 aa22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 AGXT2Q9BYV1 514 aa22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 GPHNQ9NQX3 736 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-210ENST00000464987 CAMK4Q16566 473 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 METTL24Q5JXM2 366 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 CDHR2Q9BYE9 1310 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 MCAMP43121 646 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 NAP1L2Q9ULW6 460 aaPredicted RBP22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 ZKSCAN5Q9Y2L8 839 aa22.08■■□□□ 1.13
TSPAN4-210ENST00000464987 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.12
TSPAN4-210ENST00000464987 CTSWP56202 376 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 H3BQV1 296 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 IRS4O14654 1257 aaPredicted RBP22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 UVSSAQ2YD98 709 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 IFFO2Q5TF58 517 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 PGBD1Q96JS3 809 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
TSPAN4-210ENST00000464987 SLIT2O94813 1529 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 PTPDC1A2A3K4 754 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 TICAM2Q86XR7 235 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 SCAND2PQ9GZW5 306 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 CCDC39Q9UFE4 941 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 EXOC5O00471 708 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 FGAP02671 866 aa22.06■■□□□ 1.12
TSPAN4-210ENST00000464987 WNK3Q9BYP7 1800 aa22.05■■□□□ 1.12
TSPAN4-210ENST00000464987 PDIA3P30101 505 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-210ENST00000464987 CNNM1Q9NRU3 951 aa22.05■■□□□ 1.12
TSPAN4-210ENST00000464987 DACT1Q9NYF0 836 aa22.05■■□□□ 1.12
TSPAN4-210ENST00000464987 LTBP4Q8N2S1 1624 aa22.05■■□□□ 1.12
TSPAN4-210ENST00000464987 AP5Z1O43299 807 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 VGLL2Q8N8G2 317 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 ANKRD18BA2A2Z9 1011 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 ADCY5O95622 1261 aa22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 CEBPZQ03701 1054 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 DZIP3Q86Y13 1208 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 LLPHQ9BRT6 129 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 FTOQ9C0B1 505 aaKnown RBP eCLIP22.04■■□□□ 1.12
TSPAN4-210ENST00000464987 APPBP2Q92624 585 aa22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 NUP62CLQ9H1M0 184 aa22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 SALL1Q9NSC2 1324 aa22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 ZNF500O60304 480 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 PTMAP06454 111 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 CKAP2LQ8IYA6 745 aa22.03■■□□□ 1.12
TSPAN4-210ENST00000464987 GPAA1O43292 621 aa22.02■■□□□ 1.12
TSPAN4-210ENST00000464987 NR1I2O75469 434 aa22.02■■□□□ 1.12
TSPAN4-210ENST00000464987 ZFYP08048 801 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-210ENST00000464987 GUCY1B3Q02153 619 aa22.02■■□□□ 1.12
TSPAN4-210ENST00000464987 A0A0G2JS52 829 aa22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 ADD1P35611 737 aaKnown RBP22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 HELBQ8NG08 1087 aaPredicted RBP22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 FBXO41Q8TF61 875 aa22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 ZNF830Q96NB3 372 aaPredicted RBP22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 DENND2AQ9ULE3 1009 aa22.02■■□□□ 1.11
TSPAN4-210ENST00000464987 KDM4AO75164 1064 aa22.01■■□□□ 1.11
TSPAN4-210ENST00000464987 PLCB2Q00722 1185 aa22.01■■□□□ 1.11
TSPAN4-210ENST00000464987 NKX2-3Q8TAU0 364 aa22.01■■□□□ 1.11
TSPAN4-210ENST00000464987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.01■■□□□ 1.11
TSPAN4-210ENST00000464987 DDX60Q8IY21 1712 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-210ENST00000464987 PDE8AO60658 829 aa22■■□□□ 1.11
TSPAN4-210ENST00000464987 OFD1O75665 1012 aa22■■□□□ 1.11
TSPAN4-210ENST00000464987 MAP3K11Q16584 847 aa22■■□□□ 1.11
TSPAN4-210ENST00000464987 IMMTQ16891 758 aaKnown RBP22■■□□□ 1.11
TSPAN4-210ENST00000464987 RAB11FIP4Q86YS3 637 aa22■■□□□ 1.11
TSPAN4-210ENST00000464987 ZSCAN16Q9H4T2 348 aaPredicted RBP22■■□□□ 1.11
TSPAN4-210ENST00000464987 FAM177BA6PVY3 158 aa22■■□□□ 1.11
TSPAN4-210ENST00000464987 SNAP23O00161 211 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms