RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 GPC2Q8N158 579 aa34.29■■■■□ 3.08
CHRD-211ENST00000464833 CEP126Q9P2H0 1117 aa34.29■■■■□ 3.08
CHRD-211ENST00000464833 FGFR2P21802 821 aa34.28■■■■□ 3.08
CHRD-211ENST00000464833 PUM3Q15397 648 aaKnown RBP34.28■■■■□ 3.08
CHRD-211ENST00000464833 COA1Q9GZY4 146 aa34.28■■■■□ 3.08
CHRD-211ENST00000464833 GPBP1L1Q9HC44 474 aaPredicted RBP34.28■■■■□ 3.08
CHRD-211ENST00000464833 G3V3G9 751 aa34.27■■■■□ 3.08
CHRD-211ENST00000464833 DCAF8Q5TAQ9 597 aa34.27■■■■□ 3.08
CHRD-211ENST00000464833 NOP58Q9Y2X3 529 aaKnown RBP34.27■■■■□ 3.08
CHRD-211ENST00000464833 RAD17O75943 681 aa34.26■■■■□ 3.07
CHRD-211ENST00000464833 PODNQ7Z5L7 613 aa34.26■■■■□ 3.07
CHRD-211ENST00000464833 L3MBTL3Q96JM7 780 aaPredicted RBP34.26■■■■□ 3.07
CHRD-211ENST00000464833 KCNQ5Q9NR82 932 aa34.26■■■■□ 3.07
CHRD-211ENST00000464833 G3BP1Q13283 466 aaKnown RBP eCLIP34.25■■■■□ 3.07
CHRD-211ENST00000464833 CIAPIN1Q6FI81 312 aa34.25■■■■□ 3.07
CHRD-211ENST00000464833 NMRK2Q9NPI5 230 aa34.25■■■■□ 3.07
CHRD-211ENST00000464833 ZNF646O15015 1829 aaPredicted RBP34.24■■■■□ 3.07
CHRD-211ENST00000464833 SURF6O75683 361 aaKnown RBP34.24■■■■□ 3.07
CHRD-211ENST00000464833 GJA3Q9Y6H8 435 aa34.24■■■■□ 3.07
CHRD-211ENST00000464833 TNIP1Q15025 636 aa34.23■■■■□ 3.07
CHRD-211ENST00000464833 TFCP2Q12800 502 aa34.22■■■■□ 3.07
CHRD-211ENST00000464833 ZNF804AQ7Z570 1209 aa34.22■■■■□ 3.07
CHRD-211ENST00000464833 LPIN2Q92539 896 aa34.22■■■■□ 3.07
CHRD-211ENST00000464833 CD209Q9NNX6 404 aa34.22■■■■□ 3.07
CHRD-211ENST00000464833 SCN4AP35499 1836 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 ARAP2Q8WZ64 1704 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 POTECB2RU33 542 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 HMMRO75330 724 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 SASH1O94885 1247 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 ATP2B3Q16720 1220 aa34.21■■■■□ 3.07
CHRD-211ENST00000464833 FAM84BQ96KN1 310 aaPredicted RBP34.21■■■■□ 3.07
CHRD-211ENST00000464833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.21■■■■□ 3.07
CHRD-211ENST00000464833 PSMD14O00487 310 aa34.2■■■■□ 3.07
CHRD-211ENST00000464833 IFIT1P09914 478 aaKnown RBP34.2■■■■□ 3.07
CHRD-211ENST00000464833 GYG1P46976 350 aa34.2■■■■□ 3.07
CHRD-211ENST00000464833 RRAGCQ9HB90 399 aa34.2■■■■□ 3.07
CHRD-211ENST00000464833 SLC5A1P13866 664 aa34.19■■■■□ 3.06
CHRD-211ENST00000464833 IL1R1P14778 569 aa34.19■■■■□ 3.06
CHRD-211ENST00000464833 FBXO33Q7Z6M2 555 aa34.19■■■■□ 3.06
CHRD-211ENST00000464833 VIL1P09327 827 aaKnown RBP34.17■■■■□ 3.06
CHRD-211ENST00000464833 HIBADHP31937 336 aaKnown RBP34.17■■■■□ 3.06
CHRD-211ENST00000464833 OS9Q13438 667 aaPredicted RBP34.17■■■■□ 3.06
CHRD-211ENST00000464833 USP17L3A6NCW0 530 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 USP17L4A6NCW7 530 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 KIF3CO14782 793 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 VEGFAP15692 232 aaPredicted RBP34.16■■■■□ 3.06
CHRD-211ENST00000464833 SCNN1DP51172 638 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 USP17L1Q7RTZ2 530 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 EXOC6BQ9Y2D4 811 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 AKAP2Q9Y2D5 859 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 PCDHB15Q9Y5E8 787 aa34.16■■■■□ 3.06
CHRD-211ENST00000464833 ZNF609O15014 1411 aa34.15■■■■□ 3.06
CHRD-211ENST00000464833 GMPSP49915 693 aaPredicted RBP34.15■■■■□ 3.06
CHRD-211ENST00000464833 CAVIN4Q5BKX8 364 aa34.15■■■■□ 3.06
CHRD-211ENST00000464833 TDRD7Q8NHU6 1098 aaKnown RBP34.14■■■■□ 3.06
CHRD-211ENST00000464833 A0A1B0GUL7 405 aa34.13■■■■□ 3.05
CHRD-211ENST00000464833 BCAMP50895 628 aa34.13■■■■□ 3.05
CHRD-211ENST00000464833 STRIP1Q5VSL9 837 aa34.13■■■■□ 3.05
CHRD-211ENST00000464833 ZBTB12Q9Y330 459 aaPredicted RBP34.13■■■■□ 3.05
CHRD-211ENST00000464833 IQCA1LA6NCM1 817 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 TIMM10P62072 90 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 AAMPQ13685 434 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 HSP90AB4PQ58FF6 505 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 DACT2Q5SW24 774 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 EXOC6Q8TAG9 804 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 GPR108Q9NPR9 543 aa34.12■■■■□ 3.05
CHRD-211ENST00000464833 RPS12P25398 132 aaKnown RBP34.11■■■■□ 3.05
CHRD-211ENST00000464833 ADORA1P30542 326 aa34.11■■■■□ 3.05
CHRD-211ENST00000464833 RSBN1LQ6PCB5 846 aaPredicted RBP34.11■■■■□ 3.05
CHRD-211ENST00000464833 VPS37DQ86XT2 251 aa34.11■■■■□ 3.05
CHRD-211ENST00000464833 GPRC5DQ9NZD1 345 aa34.11■■■■□ 3.05
CHRD-211ENST00000464833 HACL1Q9UJ83 578 aa34.11■■■■□ 3.05
CHRD-211ENST00000464833 GTF2IP78347 998 aa34.1■■■■□ 3.05
CHRD-211ENST00000464833 TTLL5Q6EMB2 1281 aa34.1■■■■□ 3.05
CHRD-211ENST00000464833 ERC1Q8IUD2 1116 aa34.1■■■■□ 3.05
CHRD-211ENST00000464833 DPF2Q92785 391 aa34.1■■■■□ 3.05
CHRD-211ENST00000464833 GMLQ99445 158 aa34.09■■■■□ 3.05
CHRD-211ENST00000464833 TAF1DQ9H5J8 278 aaPredicted RBP34.09■■■■□ 3.05
CHRD-211ENST00000464833 MYH13Q9UKX3 1938 aa34.09■■■■□ 3.05
CHRD-211ENST00000464833 LMOD1P29536 600 aaPredicted RBP34.08■■■■□ 3.05
CHRD-211ENST00000464833 EPS15P42566 896 aa34.08■■■■□ 3.05
CHRD-211ENST00000464833 TNNI3KQ59H18 835 aa34.08■■■■□ 3.05
CHRD-211ENST00000464833 AGBL3Q8NEM8 1001 aa34.08■■■■□ 3.05
CHRD-211ENST00000464833 FPGT-TNNI3KV9GXZ4 949 aa34.08■■■■□ 3.05
CHRD-211ENST00000464833 FAM205AQ6ZU69 1335 aa34.08■■■■□ 3.05
CHRD-211ENST00000464833 FBXW7Q969H0 707 aa34.07■■■■□ 3.05
CHRD-211ENST00000464833 XAGE2Q96GT9 111 aa34.07■■■■□ 3.05
CHRD-211ENST00000464833 MXD3Q9BW11 206 aa34.07■■■■□ 3.05
CHRD-211ENST00000464833 IQSEC3Q9UPP2 1182 aaPredicted RBP34.06■■■■□ 3.04
CHRD-211ENST00000464833 EPHX2P34913 555 aa34.05■■■■□ 3.04
CHRD-211ENST00000464833 PHKA1P46020 1223 aa34.05■■■■□ 3.04
CHRD-211ENST00000464833 IRX6P78412 446 aaPredicted RBP34.05■■■■□ 3.04
CHRD-211ENST00000464833 RHPN1Q8TCX5 695 aa34.05■■■■□ 3.04
CHRD-211ENST00000464833 NEUROD6Q96NK8 337 aa34.05■■■■□ 3.04
CHRD-211ENST00000464833 MYO3BQ8WXR4 1341 aa34.05■■■■□ 3.04
CHRD-211ENST00000464833 SHTN1A0MZ66 631 aa34.04■■■■□ 3.04
CHRD-211ENST00000464833 RAB11FIP3O75154 756 aa34.04■■■■□ 3.04
CHRD-211ENST00000464833 CNOT7Q9UIV1 285 aaKnown RBP34.04■■■■□ 3.04
CHRD-211ENST00000464833 ZBTB22O15209 634 aa34.04■■■■□ 3.04
CHRD-211ENST00000464833 CCDC102BQ68D86 513 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms