RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
USP25-207ENST00000464435 CES1P23141 567 aa8.19□□□□□ -1.1
USP25-207ENST00000464435 RSPO4Q2I0M5 234 aaPredicted RBP8.19□□□□□ -1.1
USP25-207ENST00000464435 COL13A1Q5TAT6 717 aaPredicted RBP8.19□□□□□ -1.1
USP25-207ENST00000464435 CEP120Q8N960 986 aa8.19□□□□□ -1.1
USP25-207ENST00000464435 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
USP25-207ENST00000464435 FZD6O60353 706 aa8.18□□□□□ -1.1
USP25-207ENST00000464435 GDF6Q6KF10 455 aaPredicted RBP8.18□□□□□ -1.1
USP25-207ENST00000464435 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
USP25-207ENST00000464435 IL22RA1Q8N6P7 574 aa8.18□□□□□ -1.1
USP25-207ENST00000464435 PBX4Q9BYU1 374 aa8.18□□□□□ -1.1
USP25-207ENST00000464435 CNTN3Q9P232 1028 aa8.18□□□□□ -1.1
USP25-207ENST00000464435 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
USP25-207ENST00000464435 PPME1Q9Y570 386 aa8.18□□□□□ -1.1
USP25-207ENST00000464435 CYP2E1P05181 493 aaPredicted RBP8.17□□□□□ -1.1
USP25-207ENST00000464435 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
USP25-207ENST00000464435 TXNRD3Q86VQ6 643 aa8.17□□□□□ -1.1
USP25-207ENST00000464435 GJD3Q8N144 294 aa8.17□□□□□ -1.1
USP25-207ENST00000464435 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
USP25-207ENST00000464435 TRIM33Q9UPN9 1127 aa8.17□□□□□ -1.1
USP25-207ENST00000464435 SCO2A0A1W2PP80 73 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 DLL1O00548 723 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 CDC27P30260 824 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 GLYCTKQ8IVS8 523 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 C1orf127Q8N9H9 656 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 ADAM19Q9H013 955 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 USP21Q9UK80 565 aa8.16□□□□□ -1.1
USP25-207ENST00000464435 DEAF1O75398 565 aaPredicted RBP8.15□□□□□ -1.1
USP25-207ENST00000464435 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 NEFLP07196 543 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 PTPRAP18433 802 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 ECM1Q16610 540 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 TMEM130Q8N3G9 435 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
USP25-207ENST00000464435 PHACTR2O75167 634 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 EDN3P14138 238 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 ATP11AP98196 1134 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 SETDB1Q15047 1291 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 SHISA2Q6UWI4 295 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 DNAJC14Q6Y2X3 702 aaPredicted RBP8.14□□□□□ -1.11
USP25-207ENST00000464435 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
USP25-207ENST00000464435 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
USP25-207ENST00000464435 WNT8BQ93098 351 aa8.13□□□□□ -1.11
USP25-207ENST00000464435 CCDC87Q9NVE4 849 aa8.13□□□□□ -1.11
USP25-207ENST00000464435 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
USP25-207ENST00000464435 A6NHS1 94 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 NDUFB5O43674 189 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 H2AFB2P0C5Z0 115 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
USP25-207ENST00000464435 KLHL23Q8NBE8 558 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
USP25-207ENST00000464435 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
USP25-207ENST00000464435 NFKBIEO00221 500 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 DYRK3O43781 588 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 CABP4P57796 275 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 ARTNQ5T4W7 220 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 WFDC12Q8WWY7 111 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 AMOTL2Q9Y2J4 779 aa8.11□□□□□ -1.11
USP25-207ENST00000464435 PDE2AO00408 941 aaPredicted RBP8.1□□□□□ -1.11
USP25-207ENST00000464435 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
USP25-207ENST00000464435 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
USP25-207ENST00000464435 LACRTQ9GZZ8 138 aa8.1□□□□□ -1.11
USP25-207ENST00000464435 ZFYVE28Q9HCC9 887 aa8.1□□□□□ -1.11
USP25-207ENST00000464435 ZFP64Q9NPA5 681 aa8.1□□□□□ -1.11
USP25-207ENST00000464435 H3BRJ5 948 aa8.09□□□□□ -1.11
USP25-207ENST00000464435 EREGO14944 169 aa8.09□□□□□ -1.11
USP25-207ENST00000464435 AKTIPQ9H8T0 292 aa8.09□□□□□ -1.11
USP25-207ENST00000464435 OSGEPQ9NPF4 335 aa8.09□□□□□ -1.11
USP25-207ENST00000464435 LINC01387J3KSC0 135 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 FSCN2O14926 492 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 CD68P34810 354 aaPredicted RBP8.08□□□□□ -1.12
USP25-207ENST00000464435 PIP4K2BP78356 416 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 FAM129BQ96TA1 746 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 OSMRQ99650 979 aa8.08□□□□□ -1.12
USP25-207ENST00000464435 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
USP25-207ENST00000464435 F8W735 103 aaPredicted RBP8.07□□□□□ -1.12
USP25-207ENST00000464435 EPHA1P21709 976 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 MAPK1P28482 360 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 NOS3P29474 1203 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 IREB2P48200 963 aaKnown RBP8.07□□□□□ -1.12
USP25-207ENST00000464435 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
USP25-207ENST00000464435 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 BSNDQ8WZ55 320 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 BHLHE41Q9C0J9 482 aaPredicted RBP8.07□□□□□ -1.12
USP25-207ENST00000464435 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
USP25-207ENST00000464435 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
USP25-207ENST00000464435 TM4SF5O14894 197 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms