RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
ALMS1-202ENST00000464408 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 MAP2K2P36507 400 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 SCARF1Q14162 830 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 AGBL3Q8NEM8 1001 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 LINS1Q8NG48 757 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 GBA2Q9HCG7 927 aaPredicted RBP18.53■□□□□ 0.56
ALMS1-202ENST00000464408 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
ALMS1-202ENST00000464408 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
ALMS1-202ENST00000464408 CSF1RP07333 972 aa18.52■□□□□ 0.56
ALMS1-202ENST00000464408 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.56
ALMS1-202ENST00000464408 PODNQ7Z5L7 613 aa18.52■□□□□ 0.56
ALMS1-202ENST00000464408 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.56
ALMS1-202ENST00000464408 USP17L8P0C7I0 530 aa18.51■□□□□ 0.55
ALMS1-202ENST00000464408 IGHMBP2P38935 993 aaKnown RBP18.51■□□□□ 0.55
ALMS1-202ENST00000464408 BEGAINQ9BUH8 593 aa18.51■□□□□ 0.55
ALMS1-202ENST00000464408 MYOZ2Q9NPC6 264 aa18.51■□□□□ 0.55
ALMS1-202ENST00000464408 FAM155AB1AL88 458 aaPredicted RBP18.5■□□□□ 0.55
ALMS1-202ENST00000464408 SNAP23O00161 211 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 FOXO4P98177 505 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 DACT2Q5SW24 774 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 BEND3Q5T5X7 828 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 SULF1Q8IWU6 871 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 FBXW7Q969H0 707 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 CDCA5Q96FF9 252 aa18.5■□□□□ 0.55
ALMS1-202ENST00000464408 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
ALMS1-202ENST00000464408 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
ALMS1-202ENST00000464408 BRPF1P55201 1214 aaPredicted RBP18.48■□□□□ 0.55
ALMS1-202ENST00000464408 CHRNDQ07001 517 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 RGMBQ6NW40 437 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 MPHOSPH8Q99549 860 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
ALMS1-202ENST00000464408 TAF5LO75529 589 aa18.47■□□□□ 0.55
ALMS1-202ENST00000464408 NOGQ13253 232 aa18.47■□□□□ 0.55
ALMS1-202ENST00000464408 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
ALMS1-202ENST00000464408 COA1Q9GZY4 146 aa18.47■□□□□ 0.55
ALMS1-202ENST00000464408 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
ALMS1-202ENST00000464408 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 STRIP1Q5VSL9 837 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 PRAMEF18Q5VWM3 479 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 ABHD8Q96I13 439 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
ALMS1-202ENST00000464408 ANKRD2Q9GZV1 360 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 CHMP3Q9Y3E7 222 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
ALMS1-202ENST00000464408 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
ALMS1-202ENST00000464408 SASH1O94885 1247 aa18.45■□□□□ 0.54
ALMS1-202ENST00000464408 ZNF157P51786 506 aaPredicted RBP18.45■□□□□ 0.54
ALMS1-202ENST00000464408 MOB2Q70IA6 237 aa18.45■□□□□ 0.54
ALMS1-202ENST00000464408 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
ALMS1-202ENST00000464408 KCNJ4P48050 445 aa18.44■□□□□ 0.54
ALMS1-202ENST00000464408 GTF2IP78347 998 aa18.44■□□□□ 0.54
ALMS1-202ENST00000464408 KIF23Q02241 960 aaPredicted RBP18.44■□□□□ 0.54
ALMS1-202ENST00000464408 LMBR1LQ6UX01 489 aa18.44■□□□□ 0.54
ALMS1-202ENST00000464408 PITPNM2Q9BZ72 1349 aa18.44■□□□□ 0.54
ALMS1-202ENST00000464408 GRM8O00222 908 aa18.43■□□□□ 0.54
ALMS1-202ENST00000464408 WNT10BO00744 389 aa18.43■□□□□ 0.54
ALMS1-202ENST00000464408 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
ALMS1-202ENST00000464408 TTLL5Q6EMB2 1281 aa18.43■□□□□ 0.54
ALMS1-202ENST00000464408 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
ALMS1-202ENST00000464408 KIAA0825Q8IV33 1275 aa18.43■□□□□ 0.54
ALMS1-202ENST00000464408 CA12O43570 354 aa18.42■□□□□ 0.54
ALMS1-202ENST00000464408 SLC10A3P09131 477 aa18.42■□□□□ 0.54
ALMS1-202ENST00000464408 CERS5Q8N5B7 392 aa18.42■□□□□ 0.54
ALMS1-202ENST00000464408 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
ALMS1-202ENST00000464408 MYO3BQ8WXR4 1341 aa18.42■□□□□ 0.54
ALMS1-202ENST00000464408 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
ALMS1-202ENST00000464408 CCDC102AQ96A19 550 aa18.41■□□□□ 0.54
ALMS1-202ENST00000464408 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
ALMS1-202ENST00000464408 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
ALMS1-202ENST00000464408 KAZALD1Q96I82 304 aa18.4■□□□□ 0.54
ALMS1-202ENST00000464408 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
ALMS1-202ENST00000464408 ZBED3Q96IU2 234 aaPredicted RBP18.4■□□□□ 0.54
ALMS1-202ENST00000464408 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
ALMS1-202ENST00000464408 JAG2Q9Y219 1238 aa18.4■□□□□ 0.54
ALMS1-202ENST00000464408 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.54
ALMS1-202ENST00000464408 UBE2Q2LH0YL09 131 aa18.39■□□□□ 0.53
ALMS1-202ENST00000464408 PLIN1O60240 522 aa18.39■□□□□ 0.53
ALMS1-202ENST00000464408 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
ALMS1-202ENST00000464408 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
ALMS1-202ENST00000464408 MCOLN1Q9GZU1 580 aa18.39■□□□□ 0.53
ALMS1-202ENST00000464408 ALDH1L1O75891 902 aa18.38■□□□□ 0.53
ALMS1-202ENST00000464408 NBPF7P0C2Y1 421 aaPredicted RBP18.38■□□□□ 0.53
ALMS1-202ENST00000464408 CCDC57Q2TAC2 916 aa18.38■□□□□ 0.53
ALMS1-202ENST00000464408 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
ALMS1-202ENST00000464408 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
ALMS1-202ENST00000464408 MRPL50Q8N5N7 158 aaKnown RBP18.38■□□□□ 0.53
ALMS1-202ENST00000464408 PUS3Q9BZE2 481 aaKnown RBP18.38■□□□□ 0.53
ALMS1-202ENST00000464408 RNF186Q9NXI6 227 aa18.38■□□□□ 0.53
ALMS1-202ENST00000464408 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
ALMS1-202ENST00000464408 TRPA1O75762 1119 aa18.37■□□□□ 0.53
ALMS1-202ENST00000464408 FKBP1BP68106 108 aa18.37■□□□□ 0.53
ALMS1-202ENST00000464408 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
ALMS1-202ENST00000464408 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
ALMS1-202ENST00000464408 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
ALMS1-202ENST00000464408 AOX1Q06278 1338 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms