RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ZNF853P0CG23 659 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.74
HPS4-208ENST00000464362 WTAPQ15007 396 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 UTP14AQ9BVJ6 771 aaKnown RBP10.44□□□□□ -0.74
HPS4-208ENST00000464362 STX8Q9UNK0 236 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 PHKBQ93100 1093 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 GTF3C6Q969F1 213 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 ZCCHC11Q5TAX3 1644 aaKnown RBP10.44□□□□□ -0.74
HPS4-208ENST00000464362 PRR36Q9H6K5 1346 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 CAVIN2O95810 425 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 IBSPP21815 317 aaPredicted RBP10.44□□□□□ -0.74
HPS4-208ENST00000464362 CAVIN4Q5BKX8 364 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 SLC4A4Q9Y6R1 1079 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 GCKRQ14397 625 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 PHF23Q9BUL5 403 aaPredicted RBP10.44□□□□□ -0.74
HPS4-208ENST00000464362 FTOQ9C0B1 505 aaKnown RBP eCLIP10.44□□□□□ -0.74
HPS4-208ENST00000464362 NRBP1Q9UHY1 535 aa10.44□□□□□ -0.74
HPS4-208ENST00000464362 TSPY2A6NKD2 308 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 CYP7A1P22680 504 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 PIP4K2BP78356 416 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 SETQ01105 290 aaPredicted RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 ZSCAN29Q8IWY8 852 aaPredicted RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 PLIN2Q99541 437 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 CCDC94Q9BW85 323 aaPredicted RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 CCDC194A0A1B0GVG4 234 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 hCG_1642624A0A1W2PR95 340 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 PHACTR2O75167 634 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 SLU7O95391 586 aaKnown RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 LMAN1P49257 510 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 BEND3Q5T5X7 828 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 CATIPQ7Z7H3 387 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 RTN1Q16799 776 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 PTPN21Q16825 1174 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 KIAA0232Q92628 1395 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 IBTKQ9P2D0 1353 aaPredicted RBP10.43□□□□□ -0.74
HPS4-208ENST00000464362 SYNMO15061 1565 aa10.43□□□□□ -0.74
HPS4-208ENST00000464362 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
HPS4-208ENST00000464362 ZNF75DP51815 510 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 FAM160A1Q05DH4 1040 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 CCDC150Q8NCX0 1101 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 PRDM1O75626 825 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 UBA7P41226 1012 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 RBM5P52756 815 aaKnown RBP eCLIP10.42□□□□□ -0.74
HPS4-208ENST00000464362 MYRIPQ8NFW9 859 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 USP28Q96RU2 1077 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 KIF2CQ99661 725 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 CRACR2AQ9BSW2 395 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 METTL22Q9BUU2 404 aaPredicted RBP10.42□□□□□ -0.74
HPS4-208ENST00000464362 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 SEPT11Q9NVA2 429 aaKnown RBP10.42□□□□□ -0.74
HPS4-208ENST00000464362 ANKIB1Q9P2G1 1089 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 PUF60Q9UHX1 559 aaKnown RBP10.42□□□□□ -0.74
HPS4-208ENST00000464362 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 STAMQ92783 540 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 MAPK8IP1Q9UQF2 711 aa10.42□□□□□ -0.74
HPS4-208ENST00000464362 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
HPS4-208ENST00000464362 TDRD12Q587J7 1177 aaKnown RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 MAGEB6Q8N7X4 407 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 LSG1Q9H089 658 aaKnown RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 RNF41Q9H4P4 317 aaPredicted RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 ZNF589Q86UQ0 364 aaPredicted RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 KBTBD3Q8NAB2 608 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 UBA5Q9GZZ9 404 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 EYA2O00167 538 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 EXOC5O00471 708 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 MTIF2P46199 727 aaKnown RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 ELF2Q15723 593 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 RRAGBQ5VZM2 374 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 MPHOSPH10O00566 681 aaKnown RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 TTF1Q15361 905 aaPredicted RBP10.41□□□□□ -0.74
HPS4-208ENST00000464362 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
HPS4-208ENST00000464362 TRPM2O94759 1503 aa10.4□□□□□ -0.74
HPS4-208ENST00000464362 GPAA1O43292 621 aa10.4□□□□□ -0.74
HPS4-208ENST00000464362 MEX3CQ5U5Q3 659 aaKnown RBP10.4□□□□□ -0.74
HPS4-208ENST00000464362 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
HPS4-208ENST00000464362 KLHL34Q8N239 644 aa10.4□□□□□ -0.74
HPS4-208ENST00000464362 HSPA2P54652 639 aa10.4□□□□□ -0.74
HPS4-208ENST00000464362 ZNF444Q8N0Y2 327 aaPredicted RBP10.4□□□□□ -0.74
HPS4-208ENST00000464362 CROCC2H7BZ55 1655 aa10.4□□□□□ -0.74
HPS4-208ENST00000464362 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.75
HPS4-208ENST00000464362 IRS4O14654 1257 aaPredicted RBP10.4□□□□□ -0.75
HPS4-208ENST00000464362 MBD4O95243 580 aa10.4□□□□□ -0.75
HPS4-208ENST00000464362 CACNA2D4Q7Z3S7 1137 aa10.4□□□□□ -0.75
HPS4-208ENST00000464362 ZNF500O60304 480 aaPredicted RBP10.39□□□□□ -0.75
HPS4-208ENST00000464362 TAF5LO75529 589 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 ZAP70P43403 619 aa10.39□□□□□ -0.75
HPS4-208ENST00000464362 SPA17Q15506 151 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms