RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 STK31Q9BXU1 1019 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 MYOZ2Q9NPC6 264 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 SLC10A3P09131 477 aa29.76■■■□□ 2.35
SSNA1-203ENST00000463511 MLLT1Q03111 559 aaPredicted RBP29.76■■■□□ 2.35
SSNA1-203ENST00000463511 SAGE1Q9NXZ1 904 aa29.76■■■□□ 2.35
SSNA1-203ENST00000463511 BSDC1Q9NW68 430 aaPredicted RBP29.75■■■□□ 2.35
SSNA1-203ENST00000463511 MINPP1Q9UNW1 487 aa29.75■■■□□ 2.35
SSNA1-203ENST00000463511 RGS19P49795 217 aa29.74■■■□□ 2.35
SSNA1-203ENST00000463511 SCAF8Q9UPN6 1271 aaKnown RBP29.74■■■□□ 2.35
SSNA1-203ENST00000463511 PITPNM2Q9BZ72 1349 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 A0A1B0GUL6 1792 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 NEURL1BA8MQ27 555 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 TRPA1O75762 1119 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 G2E3Q7L622 706 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 UBE3BQ7Z3V4 1068 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 RNF186Q9NXI6 227 aa29.73■■■□□ 2.35
SSNA1-203ENST00000463511 CCT4P50991 539 aaKnown RBP29.72■■■□□ 2.35
SSNA1-203ENST00000463511 TWISTNBQ3B726 338 aaPredicted RBP29.71■■■□□ 2.35
SSNA1-203ENST00000463511 RASAL3Q86YV0 1011 aa29.71■■■□□ 2.35
SSNA1-203ENST00000463511 FBXW7Q969H0 707 aa29.71■■■□□ 2.35
SSNA1-203ENST00000463511 MXD3Q9BW11 206 aa29.71■■■□□ 2.35
SSNA1-203ENST00000463511 CSRNP1Q96S65 589 aa29.7■■■□□ 2.35
SSNA1-203ENST00000463511 NBPF9Q3BBW0 867 aa29.69■■■□□ 2.34
SSNA1-203ENST00000463511 DACT2Q5SW24 774 aa29.69■■■□□ 2.34
SSNA1-203ENST00000463511 WWC1Q8IX03 1113 aa29.69■■■□□ 2.34
SSNA1-203ENST00000463511 SLC4A2P04920 1241 aa29.68■■■□□ 2.34
SSNA1-203ENST00000463511 FKBP1BP68106 108 aa29.68■■■□□ 2.34
SSNA1-203ENST00000463511 CCDC27Q2M243 656 aa29.68■■■□□ 2.34
SSNA1-203ENST00000463511 MOB2Q70IA6 237 aa29.68■■■□□ 2.34
SSNA1-203ENST00000463511 H7C1W4 665 aa29.67■■■□□ 2.34
SSNA1-203ENST00000463511 IGHMBP2P38935 993 aaKnown RBP29.67■■■□□ 2.34
SSNA1-203ENST00000463511 TXNRD3Q86VQ6 643 aa29.67■■■□□ 2.34
SSNA1-203ENST00000463511 TNRC18O15417 2968 aaPredicted RBP29.66■■■□□ 2.34
SSNA1-203ENST00000463511 PRAMEF18Q5VWM3 479 aa29.66■■■□□ 2.34
SSNA1-203ENST00000463511 FAM9BQ8IZU0 186 aa29.66■■■□□ 2.34
SSNA1-203ENST00000463511 COA1Q9GZY4 146 aa29.66■■■□□ 2.34
SSNA1-203ENST00000463511 ECM29Q5VYK3 1845 aa29.66■■■□□ 2.34
SSNA1-203ENST00000463511 GCKRQ14397 625 aa29.65■■■□□ 2.34
SSNA1-203ENST00000463511 OGFOD1Q8N543 542 aa29.65■■■□□ 2.34
SSNA1-203ENST00000463511 MYO3BQ8WXR4 1341 aa29.65■■■□□ 2.34
SSNA1-203ENST00000463511 ITGA6P23229 1130 aa29.64■■■□□ 2.34
SSNA1-203ENST00000463511 KLRK1P26718 216 aa29.64■■■□□ 2.34
SSNA1-203ENST00000463511 FLIIQ13045 1269 aa29.64■■■□□ 2.34
SSNA1-203ENST00000463511 STRIP1Q5VSL9 837 aa29.64■■■□□ 2.34
SSNA1-203ENST00000463511 LEMD3Q9Y2U8 911 aa29.64■■■□□ 2.34
SSNA1-203ENST00000463511 WNT10BO00744 389 aa29.63■■■□□ 2.33
SSNA1-203ENST00000463511 PLA2G12BQ9BX93 195 aa29.63■■■□□ 2.33
SSNA1-203ENST00000463511 ZNF804BA4D1E1 1349 aa29.63■■■□□ 2.33
SSNA1-203ENST00000463511 UBE2Q2LH0YL09 131 aa29.62■■■□□ 2.33
SSNA1-203ENST00000463511 SASH1O94885 1247 aa29.62■■■□□ 2.33
SSNA1-203ENST00000463511 REM2Q8IYK8 340 aaPredicted RBP29.62■■■□□ 2.33
SSNA1-203ENST00000463511 IL16Q14005 1332 aa29.62■■■□□ 2.33
SSNA1-203ENST00000463511 CASP7P55210 303 aa29.61■■■□□ 2.33
SSNA1-203ENST00000463511 FKBP5Q13451 457 aaPredicted RBP29.61■■■□□ 2.33
SSNA1-203ENST00000463511 TTLL12Q14166 644 aaPredicted RBP29.61■■■□□ 2.33
SSNA1-203ENST00000463511 MPHOSPH8Q99549 860 aa29.61■■■□□ 2.33
SSNA1-203ENST00000463511 MYH16Q9H6N6 1097 aa29.61■■■□□ 2.33
SSNA1-203ENST00000463511 DNAAF4Q8WXU2 420 aa29.6■■■□□ 2.33
SSNA1-203ENST00000463511 ANKRD2Q9GZV1 360 aa29.6■■■□□ 2.33
SSNA1-203ENST00000463511 FANCIQ9NVI1 1328 aa29.6■■■□□ 2.33
SSNA1-203ENST00000463511 TTLL5Q6EMB2 1281 aa29.59■■■□□ 2.33
SSNA1-203ENST00000463511 KCNJ4P48050 445 aa29.58■■■□□ 2.33
SSNA1-203ENST00000463511 KIAA0825Q8IV33 1275 aa29.58■■■□□ 2.33
SSNA1-203ENST00000463511 LINS1Q8NG48 757 aa29.58■■■□□ 2.33
SSNA1-203ENST00000463511 CSF1RP07333 972 aa29.57■■■□□ 2.32
SSNA1-203ENST00000463511 CHRNDQ07001 517 aa29.57■■■□□ 2.32
SSNA1-203ENST00000463511 PDE4DIPQ5VU43 2346 aa29.57■■■□□ 2.32
SSNA1-203ENST00000463511 NF2P35240 595 aa29.56■■■□□ 2.32
SSNA1-203ENST00000463511 GTF2IP78347 998 aa29.56■■■□□ 2.32
SSNA1-203ENST00000463511 CTU1Q7Z7A3 348 aaKnown RBP29.56■■■□□ 2.32
SSNA1-203ENST00000463511 SOX10P56693 466 aa29.55■■■□□ 2.32
SSNA1-203ENST00000463511 HDAC9Q9UKV0 1011 aa29.55■■■□□ 2.32
SSNA1-203ENST00000463511 MMP14P50281 582 aa29.54■■■□□ 2.32
SSNA1-203ENST00000463511 MKRN3Q13064 507 aaKnown RBP29.54■■■□□ 2.32
SSNA1-203ENST00000463511 APOBEC3FQ8IUX4 373 aaKnown RBP29.54■■■□□ 2.32
SSNA1-203ENST00000463511 ANKRD18BA2A2Z9 1011 aa29.53■■■□□ 2.32
SSNA1-203ENST00000463511 SNAP23O00161 211 aa29.53■■■□□ 2.32
SSNA1-203ENST00000463511 TBC1D8O95759 1140 aa29.52■■■□□ 2.32
SSNA1-203ENST00000463511 PRKG1Q13976 671 aa29.52■■■□□ 2.32
SSNA1-203ENST00000463511 ZBED3Q96IU2 234 aaPredicted RBP29.52■■■□□ 2.32
SSNA1-203ENST00000463511 CD209Q9NNX6 404 aa29.52■■■□□ 2.32
SSNA1-203ENST00000463511 SALL2Q9Y467 1007 aaPredicted RBP29.52■■■□□ 2.32
SSNA1-203ENST00000463511 TAF5LO75529 589 aa29.51■■■□□ 2.31
SSNA1-203ENST00000463511 SLC34A2O95436 690 aa29.51■■■□□ 2.31
SSNA1-203ENST00000463511 NCBP3Q53F19 620 aaKnown RBP29.51■■■□□ 2.31
SSNA1-203ENST00000463511 LAMB1P07942 1786 aa29.51■■■□□ 2.31
SSNA1-203ENST00000463511 IRS2Q9Y4H2 1338 aa29.5■■■□□ 2.31
SSNA1-203ENST00000463511 VAMP4O75379 141 aa29.5■■■□□ 2.31
SSNA1-203ENST00000463511 PTPN12Q05209 780 aaKnown RBP29.5■■■□□ 2.31
SSNA1-203ENST00000463511 EXOSC9Q06265 439 aaKnown RBP29.5■■■□□ 2.31
SSNA1-203ENST00000463511 HELBQ8NG08 1087 aaPredicted RBP29.5■■■□□ 2.31
SSNA1-203ENST00000463511 CHMP3Q9Y3E7 222 aa29.5■■■□□ 2.31
SSNA1-203ENST00000463511 COL1A1P02452 1464 aaPredicted RBP29.49■■■□□ 2.31
SSNA1-203ENST00000463511 F6X3S4 739 aa29.49■■■□□ 2.31
SSNA1-203ENST00000463511 FOXO4P98177 505 aa29.49■■■□□ 2.31
SSNA1-203ENST00000463511 IFIT5Q13325 482 aaKnown RBP29.49■■■□□ 2.31
SSNA1-203ENST00000463511 ARMC9Q7Z3E5 817 aa29.49■■■□□ 2.31
SSNA1-203ENST00000463511 CERS5Q8N5B7 392 aa29.49■■■□□ 2.31
SSNA1-203ENST00000463511 ZNF296Q8WUU4 475 aaPredicted RBP29.49■■■□□ 2.31
SSNA1-203ENST00000463511 TM4SF4P48230 202 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms