RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 RASSF4Q9H2L5 321 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 DZANK1Q9NVP4 752 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 GSTT1P30711 240 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 KRT76Q01546 638 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 LDLRAD1Q5T700 205 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 MEI1Q5TIA1 1274 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 PRPF40BQ6NWY9 871 aaKnown RBP7.15□□□□□ -1.26
HERC4-208ENST00000463478 MICALL1Q8N3F8 863 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 ASAP3Q8TDY4 903 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 TCF12Q99081 682 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 OXCT2Q9BYC2 517 aaPredicted RBP7.15□□□□□ -1.26
HERC4-208ENST00000463478 PBX4Q9BYU1 374 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 NAGPAQ9UK23 515 aa7.15□□□□□ -1.26
HERC4-208ENST00000463478 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 PDE2AO00408 941 aaPredicted RBP7.14□□□□□ -1.27
HERC4-208ENST00000463478 CEP135Q66GS9 1140 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 ELMSAN1Q6PJG2 1045 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 CCNJLQ8IV13 435 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 GOLGA6L1Q8N7Z2 621 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 PLD4Q96BZ4 506 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 ABCB6Q9NP58 842 aa7.14□□□□□ -1.27
HERC4-208ENST00000463478 GDF2Q9UK05 429 aaPredicted RBP7.14□□□□□ -1.27
HERC4-208ENST00000463478 TTF2Q9UNY4 1162 aaKnown RBP7.14□□□□□ -1.27
HERC4-208ENST00000463478 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 ELOA3DA6NLF2 546 aaPredicted RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 NFKBIEO00221 500 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 SMNDC1O75940 238 aaKnown RBP eCLIP7.13□□□□□ -1.27
HERC4-208ENST00000463478 ZNF76P36508 570 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 GRIA4P48058 902 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 HDLBPQ00341 1268 aaKnown RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 SRSF11Q05519 484 aaKnown RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 ELOA3BQ3SY89 546 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 PERM1Q5SV97 790 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 C9orf131Q5VYM1 1079 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 TMEM102Q8N9M5 508 aaPredicted RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 ELOA3Q8NG57 546 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 NXPE3Q969Y0 559 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 SMG9Q9H0W8 520 aaKnown RBP7.13□□□□□ -1.27
HERC4-208ENST00000463478 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
HERC4-208ENST00000463478 ADAMTS2O95450 1211 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 ALAS2P22557 587 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 FANCCQ00597 558 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 TAF1CQ15572 869 aaPredicted RBP7.12□□□□□ -1.27
HERC4-208ENST00000463478 SPRED3Q2MJR0 410 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 PSAPL1Q6NUJ1 521 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 SLCO4C1Q6ZQN7 724 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 RNF34Q969K3 372 aa7.12□□□□□ -1.27
HERC4-208ENST00000463478 BHLHE41Q9C0J9 482 aaPredicted RBP7.12□□□□□ -1.27
HERC4-208ENST00000463478 METTL5Q9NRN9 209 aaKnown RBP7.12□□□□□ -1.27
HERC4-208ENST00000463478 A0A096LPE4 126 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 A0A1W2PPZ6 126 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 ERCC5P28715 1186 aaPredicted RBP7.11□□□□□ -1.27
HERC4-208ENST00000463478 C3orf58Q8NDZ4 430 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 NUDT8Q8WV74 236 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 POP1Q99575 1024 aaKnown RBP7.11□□□□□ -1.27
HERC4-208ENST00000463478 MDFIQ99750 246 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 LPIN3Q9BQK8 851 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 LACRTQ9GZZ8 138 aa7.11□□□□□ -1.27
HERC4-208ENST00000463478 USP31Q70CQ4 1352 aa7.1□□□□□ -1.27
HERC4-208ENST00000463478 FBXO24O75426 580 aa7.1□□□□□ -1.27
HERC4-208ENST00000463478 EPXP11678 715 aa7.1□□□□□ -1.27
HERC4-208ENST00000463478 XRCC5P13010 732 aaKnown RBP7.1□□□□□ -1.27
HERC4-208ENST00000463478 ACDQ96AP0 544 aa7.1□□□□□ -1.27
HERC4-208ENST00000463478 TRIM33Q9UPN9 1127 aa7.1□□□□□ -1.27
HERC4-208ENST00000463478 FAM177BA6PVY3 158 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 RGS9O75916 674 aaPredicted RBP7.09□□□□□ -1.27
HERC4-208ENST00000463478 PTPRAP18433 802 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 ITPKAP23677 461 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 ST13P50502 369 aaKnown RBP7.09□□□□□ -1.27
HERC4-208ENST00000463478 GDF6Q6KF10 455 aaPredicted RBP7.09□□□□□ -1.27
HERC4-208ENST00000463478 TPTE2Q6XPS3 522 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
HERC4-208ENST00000463478 METTL16Q86W50 562 aaKnown RBP7.09□□□□□ -1.27
HERC4-208ENST00000463478 NT5DC4Q86YG4 428 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 MUC3BQ9H195 1237 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 FRRS1LQ9P0K9 344 aa7.09□□□□□ -1.27
HERC4-208ENST00000463478 CCDC85BQ15834 202 aaPredicted RBP7.08□□□□□ -1.28
HERC4-208ENST00000463478 HS2ST1Q7LGA3 356 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 GALNT6Q8NCL4 622 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 EDARADDQ8WWZ3 215 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 BSNDQ8WZ55 320 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 JPH1Q9HDC5 661 aaPredicted RBP7.08□□□□□ -1.28
HERC4-208ENST00000463478 GGT7Q9UJ14 662 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
HERC4-208ENST00000463478 ALBP02768 609 aa7.07□□□□□ -1.28
HERC4-208ENST00000463478 PTPN12Q05209 780 aaKnown RBP7.07□□□□□ -1.28
HERC4-208ENST00000463478 ADAMTSL4Q6UY14 1074 aa7.07□□□□□ -1.28
HERC4-208ENST00000463478 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
HERC4-208ENST00000463478 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
HERC4-208ENST00000463478 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
HERC4-208ENST00000463478 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
HERC4-208ENST00000463478 AMPD1P23109 780 aa7.06□□□□□ -1.28
HERC4-208ENST00000463478 ZNF157P51786 506 aaPredicted RBP7.06□□□□□ -1.28
HERC4-208ENST00000463478 CLEC4MQ9H2X3 399 aaPredicted RBP7.06□□□□□ -1.28
HERC4-208ENST00000463478 SH2B1Q9NRF2 756 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms