RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 SLF2Q8IX21 1173 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 CCDC24Q8N4L8 307 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 EVI5LQ96CN4 794 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 PSMD1Q99460 953 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 RTFDC1Q9BY42 306 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-210ENST00000463446 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
EPHA4-210ENST00000463446 PDGFDQ9GZP0 370 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-210ENST00000463446 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.01□□□□□ -0.97
EPHA4-210ENST00000463446 COA1Q9GZY4 146 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 IL1RAPL2Q9NP60 686 aa9.01□□□□□ -0.97
EPHA4-210ENST00000463446 MYH3P11055 1940 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 ZFYP08048 801 aaPredicted RBP9□□□□□ -0.97
EPHA4-210ENST00000463446 DPEP1P16444 411 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 FGFR2P21802 821 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
EPHA4-210ENST00000463446 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 KLHL34Q8N239 644 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 IL27Q8NEV9 243 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 WDR66Q8TBY9 1149 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 TBC1D22AQ8WUA7 517 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 JDP2Q8WYK2 163 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
EPHA4-210ENST00000463446 SUGT1Q9Y2Z0 365 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 PDS5AQ29RF7 1337 aaKnown RBP9□□□□□ -0.97
EPHA4-210ENST00000463446 NRXN2Q9P2S2 1712 aa9□□□□□ -0.97
EPHA4-210ENST00000463446 C10orf71Q711Q0 1435 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 TAF5LO75529 589 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 UFL1O94874 794 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 KCNA3P22001 575 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 VGLL2Q8N8G2 317 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 TBC1D16Q8TBP0 767 aa8.99□□□□□ -0.97
EPHA4-210ENST00000463446 CCDC8Q9H0W5 538 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-210ENST00000463446 C21orf2O43822 256 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-210ENST00000463446 LDHCP07864 332 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 CHRNA5P30532 468 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 RGS3P49796 1198 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 FKBP4Q02790 459 aaKnown RBP eCLIP8.98□□□□□ -0.97
EPHA4-210ENST00000463446 MAP3K12Q12852 859 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-210ENST00000463446 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 HAUS7Q99871 368 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
EPHA4-210ENST00000463446 UPF2Q9HAU5 1272 aaKnown RBP8.98□□□□□ -0.97
EPHA4-210ENST00000463446 LAMB2P55268 1798 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 EPB41L2O43491 1005 aaKnown RBP8.97□□□□□ -0.97
EPHA4-210ENST00000463446 IL1R1P14778 569 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-210ENST00000463446 FKBP1AP62942 108 aaKnown RBP8.97□□□□□ -0.97
EPHA4-210ENST00000463446 GSTO1P78417 241 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 GPSM2P81274 684 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 TNIP1Q15025 636 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 TTC22Q5TAA0 569 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 SPATA5Q8NB90 893 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 FAM84BQ96KN1 310 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-210ENST00000463446 MRIQ9BWK5 157 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-210ENST00000463446 TAOK3Q9H2K8 898 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 BCS1LQ9Y276 419 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 MED23Q9ULK4 1368 aa8.97□□□□□ -0.97
EPHA4-210ENST00000463446 MAP4K4O95819 1239 aaPredicted RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 KIAA2012Q0VF49 1180 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 C16orf71Q8IYS4 520 aaPredicted RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 TDRD7Q8NHU6 1098 aaKnown RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 RILPL2Q969X0 211 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 PAG1Q9NWQ8 432 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 LRP2BPQ9P2M1 347 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 DBNLQ9UJU6 430 aaKnown RBP8.96□□□□□ -0.98
EPHA4-210ENST00000463446 MAST3O60307 1309 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 MYO3BQ8WXR4 1341 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 TUBGCP6Q96RT7 1819 aa8.96□□□□□ -0.98
EPHA4-210ENST00000463446 DDX60Q8IY21 1712 aaKnown RBP8.95□□□□□ -0.98
EPHA4-210ENST00000463446 CASZ1Q86V15 1759 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 REC8O95072 547 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 BCAMP50895 628 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 GPR162Q16538 588 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 TTLL5Q6EMB2 1281 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 NIM1KQ8IY84 436 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 BOLA2Q9H3K6 86 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 CD209Q9NNX6 404 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms