RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 PDE4AP27815 886 aa17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 ADORA1P30542 326 aa17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 AACSQ86V21 672 aa17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 TLR7Q9NYK1 1049 aaKnown RBP17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 DBNLQ9UJU6 430 aaKnown RBP17.08■□□□□ 0.32
PHACTR4-203ENST00000463428 LTBP3Q9NS15 1303 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 SLC5A1P13866 664 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 KCNJ4P48050 445 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 OTUD7AQ8TE49 926 aaPredicted RBP17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 XAGE2Q96GT9 111 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
PHACTR4-203ENST00000463428 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
PHACTR4-203ENST00000463428 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
PHACTR4-203ENST00000463428 SBF1O95248 1867 aa17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 PRELPP51888 382 aa17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 CHD4Q14839 1912 aa17.05■□□□□ 0.32
PHACTR4-203ENST00000463428 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 GYG1P46976 350 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 BCAMP50895 628 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 EYA3Q99504 573 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 GOLGB1Q14789 3259 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 RIMBP2O15034 1052 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 ZBTB22O15209 634 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 PHKA1P46020 1223 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 RASSF7Q02833 373 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 CCDC102BQ68D86 513 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 PLEKHM2Q8IWE5 1019 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 ZC3H12CQ9C0D7 883 aaKnown RBP17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
PHACTR4-203ENST00000463428 AKAP11Q9UKA4 1901 aa17.03■□□□□ 0.32
PHACTR4-203ENST00000463428 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
PHACTR4-203ENST00000463428 GPR162Q16538 588 aa17.03■□□□□ 0.32
PHACTR4-203ENST00000463428 AOC3Q16853 763 aa17.03■□□□□ 0.32
PHACTR4-203ENST00000463428 COL4A5P29400 1685 aa17.03■□□□□ 0.32
PHACTR4-203ENST00000463428 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 PDE1AP54750 535 aa17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 CD209Q9NNX6 404 aa17.02■□□□□ 0.31
PHACTR4-203ENST00000463428 DICER1Q9UPY3 1922 aaKnown RBP17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 MX1P20591 662 aa17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 ARID4AP29374 1257 aaPredicted RBP17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 COA1Q9GZY4 146 aa17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
PHACTR4-203ENST00000463428 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 PPIP5K2O43314 1243 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 GRIN3BO60391 1043 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 IL1R1P14778 569 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 DOK7Q18PE1 504 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 GORABQ5T7V8 394 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 SCN9AQ15858 1988 aa17■□□□□ 0.31
PHACTR4-203ENST00000463428 ATP5JP18859 108 aa16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 SCARF1Q14162 830 aa16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 ZNF804AQ7Z570 1209 aa16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.99■□□□□ 0.31
PHACTR4-203ENST00000463428 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 MCAMP43121 646 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 AOX1Q06278 1338 aa16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
PHACTR4-203ENST00000463428 YDJCA8MPS7 323 aa16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 RASGRF1Q13972 1273 aa16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 VPS37DQ86XT2 251 aa16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 HMG20BQ9P0W2 317 aa16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 PSME4Q14997 1843 aa16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 COL1A1P02452 1464 aaPredicted RBP16.97■□□□□ 0.31
PHACTR4-203ENST00000463428 SEMA3EO15041 775 aa16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 ECE2O60344 883 aa16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 LMNB1P20700 586 aa16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 KCNQ5Q9NR82 932 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms