RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 LIN7BQ9HAP6 207 aa6.96□□□□□ -1.3
VRK2-208ENST00000463222 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
VRK2-208ENST00000463222 TRAK1Q9UPV9 953 aa6.96□□□□□ -1.3
VRK2-208ENST00000463222 FBXO24O75426 580 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 FAM157BP0CG42 384 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 MAPTP10636 758 aaKnown RBP6.95□□□□□ -1.3
VRK2-208ENST00000463222 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
VRK2-208ENST00000463222 MAP3K11Q16584 847 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 LYPD4Q6UWN0 246 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 RAB44Q7Z6P3 723 aaPredicted RBP6.95□□□□□ -1.3
VRK2-208ENST00000463222 NCAPG2Q86XI2 1143 aa6.95□□□□□ -1.3
VRK2-208ENST00000463222 OXCT2Q9BYC2 517 aaPredicted RBP6.95□□□□□ -1.3
VRK2-208ENST00000463222 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
VRK2-208ENST00000463222 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 BNIP3LO60238 219 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
VRK2-208ENST00000463222 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
VRK2-208ENST00000463222 DBN1Q16643 649 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 MCF2L2Q86YR7 1114 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 BHMTQ93088 406 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 OSMRQ99650 979 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 ENAMQ9NRM1 1142 aa6.94□□□□□ -1.3
VRK2-208ENST00000463222 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.94□□□□□ -1.3
VRK2-208ENST00000463222 PSAPP07602 524 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 ATF4P18848 351 aaPredicted RBP6.93□□□□□ -1.3
VRK2-208ENST00000463222 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
VRK2-208ENST00000463222 GJA8P48165 433 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 SPEM2Q0P670 501 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 CCDC144BQ3MJ40 725 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 SPATA32Q96LK8 384 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 TCF12Q99081 682 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.93□□□□□ -1.3
VRK2-208ENST00000463222 SPON2Q9BUD6 331 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 NOC4LQ9BVI4 516 aaKnown RBP6.93□□□□□ -1.3
VRK2-208ENST00000463222 ABCB6Q9NP58 842 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 MBIPQ9NS73 344 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 CUEDC1Q9NWM3 386 aaPredicted RBP6.93□□□□□ -1.3
VRK2-208ENST00000463222 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
VRK2-208ENST00000463222 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 ADAMTS1Q9UHI8 967 aa6.93□□□□□ -1.3
VRK2-208ENST00000463222 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 CD33P20138 364 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 HYAL2Q12891 473 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 LBRQ14739 615 aaKnown RBP6.92□□□□□ -1.3
VRK2-208ENST00000463222 SPRED3Q2MJR0 410 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 PRPF40BQ6NWY9 871 aaKnown RBP6.92□□□□□ -1.3
VRK2-208ENST00000463222 TPTE2Q6XPS3 522 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 TRIM22Q8IYM9 498 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 ZNF837Q96EG3 531 aaPredicted RBP6.92□□□□□ -1.3
VRK2-208ENST00000463222 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
VRK2-208ENST00000463222 LRRC4BQ9NT99 713 aa6.92□□□□□ -1.3
VRK2-208ENST00000463222 STK10O94804 968 aaKnown RBP6.91□□□□□ -1.3
VRK2-208ENST00000463222 FGRP09769 529 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 GRIA4P48058 902 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
VRK2-208ENST00000463222 RBL2Q08999 1139 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 KIAA0825Q8IV33 1275 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 HHIPQ96QV1 700 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 CADPSQ9ULU8 1353 aa6.91□□□□□ -1.3
VRK2-208ENST00000463222 J3QW42 95 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 EIF4A3P38919 411 aaKnown RBP6.9□□□□□ -1.3
VRK2-208ENST00000463222 PLAURQ03405 335 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 LAMC2Q13753 1193 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 FOXR1Q6PIV2 292 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 DHX32Q7L7V1 743 aaKnown RBP6.9□□□□□ -1.3
VRK2-208ENST00000463222 CEP120Q8N960 986 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 EAF1Q96JC9 268 aaPredicted RBP6.9□□□□□ -1.3
VRK2-208ENST00000463222 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 PUS7Q96PZ0 661 aaKnown RBP6.9□□□□□ -1.3
VRK2-208ENST00000463222 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 DZANK1Q9NVP4 752 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
VRK2-208ENST00000463222 H7C1W4 665 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 KIF4AO95239 1232 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 CELA3AP09093 270 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 XRCC5P13010 732 aaKnown RBP6.89□□□□□ -1.31
VRK2-208ENST00000463222 FAM160A1Q05DH4 1040 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 PWP1Q13610 501 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 ZNF296Q8WUU4 475 aaPredicted RBP6.89□□□□□ -1.31
VRK2-208ENST00000463222 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
VRK2-208ENST00000463222 PPM1HQ9ULR3 514 aa6.89□□□□□ -1.31
VRK2-208ENST00000463222 IGF1RP08069 1367 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 ZBTB42B2RXF5 422 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 NFKBIEO00221 500 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
VRK2-208ENST00000463222 PF4P02776 101 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms