RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 HMX2A2RU54 273 aa8.04□□□□□ -1.12
USH2A-203ENST00000463147 PRR19A6NJB7 356 aa8.04□□□□□ -1.12
USH2A-203ENST00000463147 A6NJR5 290 aa8.04□□□□□ -1.12
USH2A-203ENST00000463147 SUPT5HO00267 1087 aaKnown RBP8.04□□□□□ -1.12
USH2A-203ENST00000463147 TRIP4Q15650 581 aaPredicted RBP8.04□□□□□ -1.12
USH2A-203ENST00000463147 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
USH2A-203ENST00000463147 RNF208Q9H0X6 261 aa8.04□□□□□ -1.12
USH2A-203ENST00000463147 OSGEPQ9NPF4 335 aa8.04□□□□□ -1.12
USH2A-203ENST00000463147 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
USH2A-203ENST00000463147 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
USH2A-203ENST00000463147 FZD5Q13467 585 aa8.03□□□□□ -1.12
USH2A-203ENST00000463147 CPSF6Q16630 551 aaKnown RBP eCLIP8.03□□□□□ -1.12
USH2A-203ENST00000463147 PBX4Q9BYU1 374 aa8.03□□□□□ -1.12
USH2A-203ENST00000463147 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
USH2A-203ENST00000463147 KCNF1Q9H3M0 494 aa8.03□□□□□ -1.12
USH2A-203ENST00000463147 ATP11AP98196 1134 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 TXNDC11Q6PKC3 985 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 BEND4Q6ZU67 534 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 RASSF4Q9H2L5 321 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 ABI2Q9NYB9 513 aaPredicted RBP8.02□□□□□ -1.13
USH2A-203ENST00000463147 KCNK4Q9NYG8 393 aa8.02□□□□□ -1.13
USH2A-203ENST00000463147 H3BRJ5 948 aa8.01□□□□□ -1.13
USH2A-203ENST00000463147 TM4SF5O14894 197 aa8.01□□□□□ -1.13
USH2A-203ENST00000463147 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
USH2A-203ENST00000463147 BMP3P12645 472 aa8.01□□□□□ -1.13
USH2A-203ENST00000463147 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
USH2A-203ENST00000463147 NOVA2Q9UNW9 492 aaKnown RBP8.01□□□□□ -1.13
USH2A-203ENST00000463147 ARL4DP49703 201 aa8□□□□□ -1.13
USH2A-203ENST00000463147 COL13A1Q5TAT6 717 aaPredicted RBP8□□□□□ -1.13
USH2A-203ENST00000463147 PDE12Q6L8Q7 609 aaKnown RBP8□□□□□ -1.13
USH2A-203ENST00000463147 FDX2Q6P4F2 183 aa8□□□□□ -1.13
USH2A-203ENST00000463147 ABTB2Q8N961 1025 aa8□□□□□ -1.13
USH2A-203ENST00000463147 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
USH2A-203ENST00000463147 ADGRE2Q9UHX3 823 aa8□□□□□ -1.13
USH2A-203ENST00000463147 EPHA1P21709 976 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 ZAP70P43403 619 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 ELOAQ14241 798 aaKnown RBP7.99□□□□□ -1.13
USH2A-203ENST00000463147 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 CEP120Q8N960 986 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 FOXD4L4Q8WXT5 416 aaPredicted RBP7.99□□□□□ -1.13
USH2A-203ENST00000463147 PRIMPOLQ96LW4 560 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 PIM2Q9P1W9 311 aa7.99□□□□□ -1.13
USH2A-203ENST00000463147 ANGEL1Q9UNK9 670 aaKnown RBP7.99□□□□□ -1.13
USH2A-203ENST00000463147 GAS2O43903 313 aaKnown RBP7.98□□□□□ -1.13
USH2A-203ENST00000463147 ADAMTS4O75173 837 aa7.98□□□□□ -1.13
USH2A-203ENST00000463147 CDC25BP30305 580 aa7.98□□□□□ -1.13
USH2A-203ENST00000463147 KLHDC7BQ96G42 594 aa7.98□□□□□ -1.13
USH2A-203ENST00000463147 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
USH2A-203ENST00000463147 MEGF11A6BM72 1044 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 WDR64B1ANS9 1081 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
USH2A-203ENST00000463147 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 UBASH3BQ8TF42 649 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 SAP130Q9H0E3 1048 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 SH2B1Q9NRF2 756 aaPredicted RBP7.97□□□□□ -1.13
USH2A-203ENST00000463147 STIM2Q9P246 746 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 LEMD3Q9Y2U8 911 aa7.97□□□□□ -1.13
USH2A-203ENST00000463147 PRMT3O60678 531 aa7.96□□□□□ -1.14
USH2A-203ENST00000463147 ADAM11O75078 769 aa7.96□□□□□ -1.14
USH2A-203ENST00000463147 PREPP48147 710 aa7.96□□□□□ -1.14
USH2A-203ENST00000463147 OCLNQ16625 522 aa7.96□□□□□ -1.14
USH2A-203ENST00000463147 POP1Q99575 1024 aaKnown RBP7.96□□□□□ -1.14
USH2A-203ENST00000463147 TNFRSF10BO14763 440 aa7.95□□□□□ -1.14
USH2A-203ENST00000463147 DDX3YO15523 660 aaKnown RBP7.95□□□□□ -1.14
USH2A-203ENST00000463147 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
USH2A-203ENST00000463147 PMEPA1Q969W9 287 aa7.95□□□□□ -1.14
USH2A-203ENST00000463147 ASIC4Q96FT7 647 aa7.95□□□□□ -1.14
USH2A-203ENST00000463147 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
USH2A-203ENST00000463147 METTL22Q9BUU2 404 aaPredicted RBP7.95□□□□□ -1.14
USH2A-203ENST00000463147 ARID1BQ8NFD5 2236 aaPredicted RBP7.95□□□□□ -1.14
USH2A-203ENST00000463147 MAP4P27816 1152 aaKnown RBP7.94□□□□□ -1.14
USH2A-203ENST00000463147 OSBPL1AQ9BXW6 950 aa7.94□□□□□ -1.14
USH2A-203ENST00000463147 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
USH2A-203ENST00000463147 CXXC1Q9P0U4 656 aaPredicted RBP7.94□□□□□ -1.14
USH2A-203ENST00000463147 FOSL1P15407 271 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 PCSK2P16519 638 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 C19orf57Q0VDD7 668 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 KRTAP4-7Q9BYR0 210 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 CYP4F12Q9HCS2 524 aa7.93□□□□□ -1.14
USH2A-203ENST00000463147 PRNPP04156 253 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 LCE1DQ5T752 114 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 NUTM2GQ5VZR2 741 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 XKR5Q6UX68 686 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 ZNF438Q7Z4V0 828 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 VSIG10LQ86VR7 867 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 ZMYND15Q9H091 742 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 SALL4Q9UJQ4 1053 aa7.92□□□□□ -1.14
USH2A-203ENST00000463147 PDE2AO00408 941 aaPredicted RBP7.91□□□□□ -1.14
USH2A-203ENST00000463147 CYP2E1P05181 493 aaPredicted RBP7.91□□□□□ -1.14
USH2A-203ENST00000463147 RXRBP28702 533 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 NLRP12P59046 1061 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 CDCA8Q53HL2 280 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 PAOXQ6QHF9 649 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 ABI1Q8IZP0 508 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 YIPF2Q9BWQ6 316 aa7.91□□□□□ -1.14
USH2A-203ENST00000463147 SUGCTQ9HAC7 445 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms