RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
MSH5-211ENST00000463144 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 MYH7P12883 1935 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 FOXP2O15409 715 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
MSH5-211ENST00000463144 KRT32Q14532 448 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
MSH5-211ENST00000463144 ARAP2Q8WZ64 1704 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 MROH5Q6ZUA9 1318 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 SYT1P21579 422 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 PHKA1P46020 1223 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
MSH5-211ENST00000463144 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
MSH5-211ENST00000463144 GJB2P29033 226 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 LPIN2Q92539 896 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 RTL9Q8NET4 1388 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 ZFYP08048 801 aaPredicted RBP12.12□□□□□ -0.47
MSH5-211ENST00000463144 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
MSH5-211ENST00000463144 ANKRD1Q15327 319 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
MSH5-211ENST00000463144 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
MSH5-211ENST00000463144 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
MSH5-211ENST00000463144 GOLGA6L3A6NEY3 463 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 STX6O43752 255 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 GPT2Q8TD30 523 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 TCHHQ07283 1943 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 TAF1P21675 1872 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 Q6ZUG5 572 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 APPBP2Q92624 585 aa12.11□□□□□ -0.47
MSH5-211ENST00000463144 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
MSH5-211ENST00000463144 SBF2Q86WG5 1849 aa12.1□□□□□ -0.47
MSH5-211ENST00000463144 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
MSH5-211ENST00000463144 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSH5-211ENST00000463144 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
MSH5-211ENST00000463144 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
MSH5-211ENST00000463144 BRPF3Q9ULD4 1205 aa12.1□□□□□ -0.47
MSH5-211ENST00000463144 E7EWF7 191 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 ADD2P35612 726 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 EXOSC10Q01780 885 aaKnown RBP12.09□□□□□ -0.47
MSH5-211ENST00000463144 LRRC2Q9BYS8 371 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 SRP68Q9UHB9 627 aaKnown RBP12.09□□□□□ -0.47
MSH5-211ENST00000463144 LY75O60449 1722 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 SLC5A1P13866 664 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 STK3Q13188 491 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
MSH5-211ENST00000463144 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
MSH5-211ENST00000463144 F13A1P00488 732 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 FGAP02671 866 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 NCLP19338 710 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 IGHMBP2P38935 993 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 CHRNDQ07001 517 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 SLC9C2Q5TAH2 1124 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 DHX32Q7L7V1 743 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 A0A1B0GUL6 1792 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 AFF2P51816 1311 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 RGL2O15211 777 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 GPAA1O43292 621 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 SF3B3Q15393 1217 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.481e-12■■■■□ 21.3
MSH5-211ENST00000463144 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
MSH5-211ENST00000463144 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
MSH5-211ENST00000463144 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
MSH5-211ENST00000463144 GNPATO15228 680 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
MSH5-211ENST00000463144 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 SPATA5Q8NB90 893 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms