RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 GOLM1Q8NBJ4 401 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
COPS3-205ENST00000463097 KCNB2Q92953 911 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 OSMRQ99650 979 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 ZKSCAN3Q9BRR0 538 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 PRKAG3Q9UGI9 489 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 R3HCC1Q9Y3T6 440 aaKnown RBP8.26□□□□□ -1.09
COPS3-205ENST00000463097 hCG_2014768A0A024R1R8 64 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 CELA3AP09093 270 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 RARAP10276 462 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 IGBP1P78318 339 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 LRP10Q7Z4F1 713 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 NKD1Q969G9 470 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 SRRTQ9BXP5 876 aaKnown RBP8.25□□□□□ -1.09
COPS3-205ENST00000463097 SNTG2Q9NY99 539 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 DYRK1BQ9Y463 629 aa8.25□□□□□ -1.09
COPS3-205ENST00000463097 IBSPP21815 317 aaPredicted RBP8.24□□□□□ -1.09
COPS3-205ENST00000463097 SFSWAPQ12872 951 aaKnown RBP8.24□□□□□ -1.09
COPS3-205ENST00000463097 MRPL14Q6P1L8 145 aaKnown RBP8.24□□□□□ -1.09
COPS3-205ENST00000463097 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
COPS3-205ENST00000463097 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
COPS3-205ENST00000463097 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
COPS3-205ENST00000463097 BRINP2Q9C0B6 783 aa8.24□□□□□ -1.09
COPS3-205ENST00000463097 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
COPS3-205ENST00000463097 FAM221BA6H8Z2 402 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 KIF4AO95239 1232 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 CRKP46108 304 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 GRIA4P48058 902 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 HYAL2Q12891 473 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 RASA3Q14644 834 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 EFHC2Q5JST6 749 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 FAM196AQ6ZSG2 479 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 SLITRK4Q8IW52 837 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 SHDQ96IW2 340 aa8.23□□□□□ -1.09
COPS3-205ENST00000463097 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
COPS3-205ENST00000463097 CWC22Q9HCG8 908 aaKnown RBP8.23□□□□□ -1.09
COPS3-205ENST00000463097 RAB11FIP3O75154 756 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 PSAPP07602 524 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 FAM157BP0CG42 384 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 ACPPP15309 386 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 ITPKAP23677 461 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 SOX18P35713 384 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 RPS26P62854 115 aaKnown RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 PNMA5Q96PV4 448 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 CHMP4AQ9BY43 222 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 DZANK1Q9NVP4 752 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
COPS3-205ENST00000463097 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
COPS3-205ENST00000463097 ENC1O14682 589 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 SMAD7O15105 426 aaKnown RBP8.21□□□□□ -1.1
COPS3-205ENST00000463097 ATXN7O15265 892 aaPredicted RBP8.21□□□□□ -1.1
COPS3-205ENST00000463097 EFSO43281 561 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PRR20EP86478 221 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PRR20CP86479 221 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PRR20DP86480 221 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PRR20BP86481 221 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PRR20AP86496 221 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 SPRED3Q2MJR0 410 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 PLEKHG4Q58EX7 1191 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 CEP120Q8N960 986 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
COPS3-205ENST00000463097 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
COPS3-205ENST00000463097 CCDC85CA6NKD9 419 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 TRPA1O75762 1119 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 ANAPC15P60006 121 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 PLAURQ03405 335 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 SCARF1Q14162 830 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 LBRQ14739 615 aaKnown RBP8.2□□□□□ -1.1
COPS3-205ENST00000463097 SEZ6Q53EL9 994 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 CCDC81Q6ZN84 652 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 CCDC113Q9H0I3 377 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 IFT57Q9NWB7 429 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 PPT2Q9UMR5 302 aa8.2□□□□□ -1.1
COPS3-205ENST00000463097 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.2□□□□□ -1.1
COPS3-205ENST00000463097 A0A096LPE4 126 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 KHNYNO15037 678 aaKnown RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 MARCH6O60337 910 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 HOXD8P13378 290 aaPredicted RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 NFKB1P19838 968 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms