RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 PDE8BO95263 885 aa20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 L3MBTL3Q96JM7 780 aaPredicted RBP20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 SHTN1A0MZ66 631 aa20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 GYG1P46976 350 aa20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 SCNN1DP51172 638 aa20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 UBE4AQ14139 1066 aa20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 C15orf52Q6ZUT6 534 aaKnown RBP20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 MXD3Q9BW11 206 aa20.72■□□□□ 0.91
HLA-DPA1-245ENST00000463066 WDR90Q96KV7 1748 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 VEGFAP15692 232 aaPredicted RBP20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 FGFR2P21802 821 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 IL15P40933 162 aaPredicted RBP20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 SIRT2Q8IXJ6 389 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 CRBNQ96SW2 442 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 COA1Q9GZY4 146 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 CD209Q9NNX6 404 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 SCN9AQ15858 1988 aa20.71■□□□□ 0.91
HLA-DPA1-245ENST00000463066 EPS15P42566 896 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 TFCP2Q12800 502 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 TNIP1Q15025 636 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 FAM84BQ96KN1 310 aaPredicted RBP20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 CEP126Q9P2H0 1117 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 FBXO3Q9UK99 471 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 JAG2Q9Y219 1238 aa20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
HLA-DPA1-245ENST00000463066 POTEIP0CG38 1075 aa20.69■□□□□ 0.9
HLA-DPA1-245ENST00000463066 POTEJP0CG39 1038 aa20.69■□□□□ 0.9
HLA-DPA1-245ENST00000463066 PODNQ7Z5L7 613 aa20.69■□□□□ 0.9
HLA-DPA1-245ENST00000463066 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
HLA-DPA1-245ENST00000463066 TAF1DQ9H5J8 278 aaPredicted RBP20.69■□□□□ 0.9
HLA-DPA1-245ENST00000463066 SURF6O75683 361 aaKnown RBP20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 SASH1O94885 1247 aa20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 PUM3Q15397 648 aaKnown RBP20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 ATP2B3Q16720 1220 aa20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 HACL1Q9UJ83 578 aa20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 IQSEC3Q9UPP2 1182 aaPredicted RBP20.68■□□□□ 0.9
HLA-DPA1-245ENST00000463066 VIL1P09327 827 aaKnown RBP20.67■□□□□ 0.9
HLA-DPA1-245ENST00000463066 ADORA1P30542 326 aa20.67■□□□□ 0.9
HLA-DPA1-245ENST00000463066 G3BP1Q13283 466 aaKnown RBP eCLIP20.67■□□□□ 0.9
HLA-DPA1-245ENST00000463066 ZNF804AQ7Z570 1209 aa20.67■□□□□ 0.9
HLA-DPA1-245ENST00000463066 USP17L3A6NCW0 530 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 USP17L4A6NCW7 530 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 EPHX2P34913 555 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 BCAMP50895 628 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 GTF2IP78347 998 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 DACT2Q5SW24 774 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 USP17L1Q7RTZ2 530 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 FBXO33Q7Z6M2 555 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
HLA-DPA1-245ENST00000463066 SLC5A1P13866 664 aa20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 IL1R1P14778 569 aa20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 TIMM10P62072 90 aa20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 LPIN2Q92539 896 aa20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 NOP58Q9Y2X3 529 aaKnown RBP20.65■□□□□ 0.9
HLA-DPA1-245ENST00000463066 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 IFIT1P09914 478 aaKnown RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 LMOD1P29536 600 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TDRD7Q8NHU6 1098 aaKnown RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 GMLQ99445 158 aa20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CHMP4BQ9H444 224 aaKnown RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CNOT7Q9UIV1 285 aaKnown RBP20.64■□□□□ 0.89
HLA-DPA1-245ENST00000463066 STRIP1Q5VSL9 837 aa20.63■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CERS5Q8N5B7 392 aa20.63■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
HLA-DPA1-245ENST00000463066 A0A1B0GUL7 405 aa20.62■□□□□ 0.89
HLA-DPA1-245ENST00000463066 EGFRP00533 1210 aa20.62■□□□□ 0.89
HLA-DPA1-245ENST00000463066 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
HLA-DPA1-245ENST00000463066 APBB1O00213 710 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TOMM70O94826 608 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 PHKA1P46020 1223 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CHAF1AQ13111 956 aaPredicted RBP20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CAVIN4Q5BKX8 364 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 RBM26Q5T8P6 1007 aaKnown RBP20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 SAMD7Q7Z3H4 446 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 VPS37DQ86XT2 251 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 DPF2Q92785 391 aa20.61■□□□□ 0.89
HLA-DPA1-245ENST00000463066 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 HIRAP54198 1017 aaPredicted RBP20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 XAGE2Q96GT9 111 aa20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 NEUROD6Q96NK8 337 aa20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 ZNF609O15014 1411 aa20.6■□□□□ 0.89
HLA-DPA1-245ENST00000463066 COL1A1P02452 1464 aaPredicted RBP20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 GRIK5Q16478 980 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms