RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	DBNDD2	Q9BQY9	259 aa		13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	EHMT1	Q9H9B1	1298 aa		13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	IQSEC2	Q5JU85	1478 aa		13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	LDHB	P07195	334 aa	Known RBP	13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	PPP2R5B	Q15173	497 aa		13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	ATL3	Q6DD88	541 aa		13.7	□□□□□ -0.22
RBM39-223	ENST00000463004	PES1	O00541	588 aa	Known RBP	13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	ZBTB43	O43298	467 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	ALDH1B1	P30837	517 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	AXIN2	Q9Y2T1	843 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	SMC2	O95347	1197 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	GJB2	P29033	226 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	CREBRF	Q8IUR6	639 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	ORC3	Q9UBD5	711 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	MTMR7	Q9Y216	660 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	TTLL7	Q6ZT98	887 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	CEP57L1	Q8IYX8	460 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	DDX11	Q96FC9	970 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	SEMA3E	O15041	775 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	BAG6	P46379	1132 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	RUFY3	Q7L099	469 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	TMEM87B	Q96K49	555 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	DSCC1	Q9BVC3	393 aa		13.69	□□□□□ -0.22
RBM39-223	ENST00000463004	CCP110	O43303	1012 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	CRKL	P46109	303 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	CCDC183	Q5T5S1	534 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	NLGN1	Q8N2Q7	840 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	GGA1	Q9UJY5	639 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	ASAP1	Q9ULH1	1129 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	ATP2B1	P20020	1258 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	NT5C2	P49902	561 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	RPS8	P62241	208 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	MAP3K11	Q16584	847 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	QTRT2	Q9H974	415 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	SMTNL1	A8MU46	457 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	CCAR1	Q8IX12	1150 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	TNPO1	Q92973	898 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	BRF1	Q92994	677 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	KIF20B	Q96Q89	1820 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	OGFOD1	Q8N543	542 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	CCDC148	Q8NFR7	591 aa		13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	LLPH	Q9BRT6	129 aa	Known RBP	13.68	□□□□□ -0.22
RBM39-223	ENST00000463004	CBFA2T2	O43439	604 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	ZSCAN22	P10073	491 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	HCLS1	P14317	486 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	PDE6B	P35913	854 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	POLA2	Q14181	598 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	PIGB	Q92521	554 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	UBR1	Q8IWV7	1749 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	KLF18	A0A0U1RQI7	1052 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	TTC6	Q86TZ1	520 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	TIMM10	P62072	90 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	PXDNL	A1KZ92	1463 aa		13.67	□□□□□ -0.22
RBM39-223	ENST00000463004	ADRA2B	P18089	450 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	UBE4A	Q14139	1066 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	MST1R	Q04912	1400 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	TRIM28	Q13263	835 aa	Known RBP	13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	MAGEB6	Q8N7X4	407 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	HAUS7	Q99871	368 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	CD163L1	Q9NR16	1453 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	MPHOSPH10	O00566	681 aa	Known RBP	13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	PRC1	O43663	620 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	UBE2H	P62256	183 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	RTN1	Q16799	776 aa		13.66	□□□□□ -0.22
RBM39-223	ENST00000463004	ADGRB2	O60241	1585 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004		H7C1W4	665 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	KANK3	Q6NY19	840 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	CEP89	Q96ST8	783 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	CCDC194	A0A1B0GVG4	234 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	IGSF3	O75054	1194 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	ATP2B4	P23634	1241 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	TNIP1	Q15025	636 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	IFIT1B	Q5T764	474 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	CUL5	Q93034	780 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	RBM28	Q9NW13	759 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	BAG4	O95429	457 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	HSPA4	P34932	840 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	HAND2	P61296	217 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004		Q6ZUG5	572 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	STK11IP	Q8N1F8	1099 aa		13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM39-223	ENST00000463004	PROSER3	Q2NL68	480 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	KLHL40	Q2TBA0	621 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	PALLD	Q8WX93	1383 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	IFT172	Q9UG01	1749 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	ZBTB1	Q9Y2K1	713 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	KIF1A	Q12756	1690 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	CEMIP	Q8WUJ3	1361 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	CDHR2	Q9BYE9	1310 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	CALML3	P27482	149 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	CEBPZ	Q03701	1054 aa	Known RBP	13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	TRIM5	Q9C035	493 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	ANO10	Q9NW15	660 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004		H0YIN7	160 aa		13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	PC	P11498	1178 aa	Known RBP	13.64	□□□□□ -0.23
RBM39-223	ENST00000463004	NLRP5	P59047	1200 aa		13.64	□□□□□ -0.23

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