RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SRGAP3	O43295	1099 aa		11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	EPHX2	P34913	555 aa		11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	EPS15	P42566	896 aa		11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	TXNRD3	Q86VQ6	643 aa		11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	PA2G4	Q9UQ80	394 aa	Known RBP	11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD4-208	ENST00000462970	APLP1	P51693	650 aa		11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	ZNF804A	Q7Z570	1209 aa		11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	RBM46	Q8TBY0	533 aa	Known RBP	11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	COG6	Q9Y2V7	657 aa		11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	RIPOR2	Q9Y4F9	1068 aa		11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	PSME4	Q14997	1843 aa		11.97	□□□□□ -0.49
PSMD4-208	ENST00000462970	USP17L3	A6NCW0	530 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	USP17L4	A6NCW7	530 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	EYA2	O00167	538 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	POTEI	P0CG38	1075 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	POTEJ	P0CG39	1038 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	RFX5	P48382	616 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	SCNN1D	P51172	638 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	PTPN12	Q05209	780 aa	Known RBP	11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	USP17L1	Q7RTZ2	530 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	SMC1B	Q8NDV3	1235 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	COA1	Q9GZY4	146 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	GPRC5D	Q9NZD1	345 aa		11.96	□□□□□ -0.49
PSMD4-208	ENST00000462970	SHTN1	A0MZ66	631 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970		H7C1D1	291 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	GYG1	P46976	350 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	RBM26	Q5T8P6	1007 aa	Known RBP	11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	PODN	Q7Z5L7	613 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	VPS37D	Q86XT2	251 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	MICALL2	Q8IY33	904 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	DNAJC5G	Q8N7S2	189 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	CEP126	Q9P2H0	1117 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	CNOT7	Q9UIV1	285 aa	Known RBP	11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	JAG2	Q9Y219	1238 aa		11.95	□□□□□ -0.5
PSMD4-208	ENST00000462970	MYH13	Q9UKX3	1938 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	PNMA6E	A0A0J9YXQ4	647 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	FRAT2	O75474	233 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	PDE8B	O95263	885 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	GTF2I	P78347	998 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	OS9	Q13438	667 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	UBE4A	Q14139	1066 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	MVP	Q14764	893 aa	Known RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	C20orf194	Q5TEA3	1177 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	CHADL	Q6NUI6	762 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	PNMA8A	Q86V59	439 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	LDHD	Q86WU2	507 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	MXD3	Q9BW11	206 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	CD209	Q9NNX6	404 aa		11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	ADARB2	Q9NS39	739 aa	Known RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMD4-208	ENST00000462970	ZBTB7B	O15156	539 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	VIL1	P09327	827 aa	Known RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	IFIT1	P09914	478 aa	Known RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	SLC5A1	P13866	664 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	RPS12	P25398	132 aa	Known RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	HIBADH	P31937	336 aa	Known RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	FSTL1	Q12841	308 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	1e-6	■■□□□ 12.5
PSMD4-208	ENST00000462970	PUM3	Q15397	648 aa	Known RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	ATP2B3	Q16720	1220 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	CAVIN4	Q5BKX8	364 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	TTLL5	Q6EMB2	1281 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	ATG9A	Q7Z3C6	839 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	DDX19B	Q9UMR2	479 aa		11.93	□□□□□ -0.5
PSMD4-208	ENST00000462970	POLR2A	P24928	1970 aa	Known RBP	11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	CIAO1	O76071	339 aa		11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	IL15	P40933	162 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	CHAF1A	Q13111	956 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	MTX1	Q13505	466 aa		11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	MAP1S	Q66K74	1059 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	SAMD7	Q7Z3H4	446 aa		11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	TRPM4	Q8TD43	1214 aa		11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970	COPRS	Q9NQ92	184 aa		11.92	□□□□□ -0.5
PSMD4-208	ENST00000462970		F8W031	263 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	SURF6	O75683	361 aa	Known RBP	11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	BCAM	P50895	628 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	ATP8B2	P98198	1209 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	TFCP2	Q12800	502 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	PDE3A	Q14432	1141 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	DACT2	Q5SW24	774 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	STRIP1	Q5VSL9	837 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	C15orf52	Q6ZUT6	534 aa	Known RBP	11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	USP50	Q70EL3	339 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	VGLL2	Q8N8G2	317 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	AGBL3	Q8NEM8	1001 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	DPF2	Q92785	391 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	FAM84B	Q96KN1	310 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	BCL11A	Q9H165	835 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	FBXO3	Q9UK99	471 aa		11.91	□□□□□ -0.5
PSMD4-208	ENST00000462970	ZNF646	O15015	1829 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMD4-208	ENST00000462970	IRS2	Q9Y4H2	1338 aa		11.9	□□□□□ -0.5
PSMD4-208	ENST00000462970	CEP350	Q5VT06	3117 aa		11.9	□□□□□ -0.5
PSMD4-208	ENST00000462970	USP17L8	P0C7I0	530 aa		11.9	□□□□□ -0.5
PSMD4-208	ENST00000462970	IL1R1	P14778	569 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms