RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 CASP7P55210 303 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 CWF19L2Q2TBE0 894 aaKnown RBP14.4□□□□□ -0.1
PTPN7-204ENST00000462815 CCDC184Q52MB2 194 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 G2E3Q7L622 706 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 USP17L1Q7RTZ2 530 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 TXNRD3Q86VQ6 643 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 MXD3Q9BW11 206 aa14.4□□□□□ -0.1
PTPN7-204ENST00000462815 SCAF8Q9UPN6 1271 aaKnown RBP14.4□□□□□ -0.1
PTPN7-204ENST00000462815 AKAP11Q9UKA4 1901 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 H7C1W4 665 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 FKBP1BP68106 108 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 CCDC27Q2M243 656 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 MOB2Q70IA6 237 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 IRS2Q9Y4H2 1338 aa14.39□□□□□ -0.11
PTPN7-204ENST00000462815 TRPA1O75762 1119 aa14.38□□□□□ -0.11
PTPN7-204ENST00000462815 KLRK1P26718 216 aa14.38□□□□□ -0.11
PTPN7-204ENST00000462815 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
PTPN7-204ENST00000462815 CDC5LQ99459 802 aaKnown RBP14.38□□□□□ -0.11
PTPN7-204ENST00000462815 PLA2G12BQ9BX93 195 aa14.38□□□□□ -0.11
PTPN7-204ENST00000462815 ZBED3Q96IU2 234 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-204ENST00000462815 G3V3G9 751 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 WNT10BO00744 389 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 CSF1RP07333 972 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 STRIP1Q5VSL9 837 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 WWC1Q8IX03 1113 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 CENPFP49454 3210 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 LAMB1P07942 1786 aa14.36□□□□□ -0.11
PTPN7-204ENST00000462815 MKI67P46013 3256 aaKnown RBP14.35□□□□□ -0.11
PTPN7-204ENST00000462815 GCKRQ14397 625 aa14.35□□□□□ -0.11
PTPN7-204ENST00000462815 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-204ENST00000462815 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
PTPN7-204ENST00000462815 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-204ENST00000462815 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
PTPN7-204ENST00000462815 COA1Q9GZY4 146 aa14.35□□□□□ -0.11
PTPN7-204ENST00000462815 MYO3BQ8WXR4 1341 aa14.35□□□□□ -0.11
PTPN7-204ENST00000462815 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
PTPN7-204ENST00000462815 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
PTPN7-204ENST00000462815 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
PTPN7-204ENST00000462815 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
PTPN7-204ENST00000462815 IL16Q14005 1332 aa14.34□□□□□ -0.11
PTPN7-204ENST00000462815 BRCA2P51587 3418 aa14.34□□□□□ -0.11
PTPN7-204ENST00000462815 SASH1O94885 1247 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 ITGA6P23229 1130 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 FLIIQ13045 1269 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
PTPN7-204ENST00000462815 ZNF804BA4D1E1 1349 aa14.33□□□□□ -0.12
PTPN7-204ENST00000462815 TM4SF4P48230 202 aa14.32□□□□□ -0.12
PTPN7-204ENST00000462815 CERS5Q8N5B7 392 aa14.32□□□□□ -0.12
PTPN7-204ENST00000462815 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
PTPN7-204ENST00000462815 FANCIQ9NVI1 1328 aa14.32□□□□□ -0.12
PTPN7-204ENST00000462815 ECM29Q5VYK3 1845 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 COL1A1P02452 1464 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-204ENST00000462815 SNAP23O00161 211 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
PTPN7-204ENST00000462815 MMP14P50281 582 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 SOX10P56693 466 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 NOM1Q5C9Z4 860 aaKnown RBP14.31□□□□□ -0.12
PTPN7-204ENST00000462815 LDLRAD1Q5T700 205 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
PTPN7-204ENST00000462815 CFHR5Q9BXR6 569 aa14.31□□□□□ -0.12
PTPN7-204ENST00000462815 VAMP4O75379 141 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 FOXO4P98177 505 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 PTPN12Q05209 780 aaKnown RBP14.3□□□□□ -0.12
PTPN7-204ENST00000462815 CHRNDQ07001 517 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 TTLL5Q6EMB2 1281 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 KIAA0825Q8IV33 1275 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 LINS1Q8NG48 757 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 ZNF296Q8WUU4 475 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-204ENST00000462815 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 ANKRD2Q9GZV1 360 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 CD209Q9NNX6 404 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 CACNA1FO60840 1977 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 AOX1Q06278 1338 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 PDE4DIPQ5VU43 2346 aa14.3□□□□□ -0.12
PTPN7-204ENST00000462815 TBC1D8O95759 1140 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 GTF2IP78347 998 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 OGFOD1Q8N543 542 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 R3HDMLQ9H3Y0 253 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 PCDHAC2Q9Y5I4 1007 aa14.29□□□□□ -0.12
PTPN7-204ENST00000462815 IL1R1P14778 569 aa14.28□□□□□ -0.12
PTPN7-204ENST00000462815 MAP3K11Q16584 847 aa14.28□□□□□ -0.12
PTPN7-204ENST00000462815 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
PTPN7-204ENST00000462815 APOBEC3FQ8IUX4 373 aaKnown RBP14.28□□□□□ -0.12
PTPN7-204ENST00000462815 FBXW7Q969H0 707 aa14.28□□□□□ -0.12
PTPN7-204ENST00000462815 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
PTPN7-204ENST00000462815 GPR25O00155 361 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 TAF5LO75529 589 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
PTPN7-204ENST00000462815 EPHA10Q5JZY3 1008 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 SPRYD7Q5W111 196 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 MYH16Q9H6N6 1097 aa14.27□□□□□ -0.13
PTPN7-204ENST00000462815 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms