RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 C15orf52Q6ZUT6 534 aaKnown RBP23.59■■□□□ 1.37
COL9A3-203ENST00000462700 MICALL2Q8IY33 904 aa23.59■■□□□ 1.37
COL9A3-203ENST00000462700 KLHDC4Q8TBB5 520 aa23.59■■□□□ 1.37
COL9A3-203ENST00000462700 CNOT7Q9UIV1 285 aaKnown RBP23.59■■□□□ 1.37
COL9A3-203ENST00000462700 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
COL9A3-203ENST00000462700 SHTN1A0MZ66 631 aa23.58■■□□□ 1.37
COL9A3-203ENST00000462700 LRRC24Q50LG9 513 aa23.58■■□□□ 1.37
COL9A3-203ENST00000462700 TMEM57Q8N5G2 664 aa23.58■■□□□ 1.37
COL9A3-203ENST00000462700 ZNF609O15014 1411 aa23.58■■□□□ 1.36
COL9A3-203ENST00000462700 USP17L3A6NCW0 530 aa23.57■■□□□ 1.36
COL9A3-203ENST00000462700 USP17L4A6NCW7 530 aa23.57■■□□□ 1.36
COL9A3-203ENST00000462700 RSBN1LQ6PCB5 846 aaPredicted RBP23.57■■□□□ 1.36
COL9A3-203ENST00000462700 USP17L1Q7RTZ2 530 aa23.57■■□□□ 1.36
COL9A3-203ENST00000462700 H7C1D1 291 aa23.56■■□□□ 1.36
COL9A3-203ENST00000462700 PTPN12Q05209 780 aaKnown RBP23.56■■□□□ 1.36
COL9A3-203ENST00000462700 UBE4AQ14139 1066 aa23.56■■□□□ 1.36
COL9A3-203ENST00000462700 MAP1SQ66K74 1059 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-203ENST00000462700 PSME4Q14997 1843 aa23.55■■□□□ 1.36
COL9A3-203ENST00000462700 METTL24Q5JXM2 366 aa23.55■■□□□ 1.36
COL9A3-203ENST00000462700 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
COL9A3-203ENST00000462700 DZIP1LQ8IYY4 767 aaKnown RBP23.55■■□□□ 1.36
COL9A3-203ENST00000462700 AGBL3Q8NEM8 1001 aa23.55■■□□□ 1.36
COL9A3-203ENST00000462700 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
COL9A3-203ENST00000462700 CD209Q9NNX6 404 aa23.55■■□□□ 1.36
COL9A3-203ENST00000462700 ITGBL1O95965 494 aaPredicted RBP23.54■■□□□ 1.36
COL9A3-203ENST00000462700 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
COL9A3-203ENST00000462700 GMLQ99445 158 aa23.54■■□□□ 1.36
COL9A3-203ENST00000462700 PASKQ96RG2 1323 aa23.54■■□□□ 1.36
COL9A3-203ENST00000462700 CEP350Q5VT06 3117 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 EYA2O00167 538 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 HIRAP54198 1017 aaPredicted RBP23.53■■□□□ 1.36
COL9A3-203ENST00000462700 HTRA3P83110 453 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 DACT2Q5SW24 774 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 STRIP1Q5VSL9 837 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 ZNF804AQ7Z570 1209 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 VGLL2Q8N8G2 317 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 FBXW7Q969H0 707 aa23.53■■□□□ 1.36
COL9A3-203ENST00000462700 RLBP1P12271 317 aa23.52■■□□□ 1.36
COL9A3-203ENST00000462700 SAMD7Q7Z3H4 446 aa23.52■■□□□ 1.36
COL9A3-203ENST00000462700 PDE8BO95263 885 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 EGFRP00533 1210 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 GNAI2P04899 355 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 IL1R1P14778 569 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 MTX1Q13505 466 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 TBC1D10BQ4KMP7 808 aaPredicted RBP23.51■■□□□ 1.35
COL9A3-203ENST00000462700 PGAP2Q9UHJ9 254 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 FBXO3Q9UK99 471 aa23.51■■□□□ 1.35
COL9A3-203ENST00000462700 ZNF646O15015 1829 aaPredicted RBP23.51■■□□□ 1.35
COL9A3-203ENST00000462700 ZNF280AP59817 542 aaPredicted RBP23.5■■□□□ 1.35
COL9A3-203ENST00000462700 GTF2IP78347 998 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 TTLL5Q6EMB2 1281 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 ATG9AQ7Z3C6 839 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 ZC3H15Q8WU90 426 aaKnown RBP23.5■■□□□ 1.35
COL9A3-203ENST00000462700 MXD3Q9BW11 206 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 SIL1Q9H173 461 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 MYO3BQ8WXR4 1341 aa23.5■■□□□ 1.35
COL9A3-203ENST00000462700 CIAO1O76071 339 aa23.49■■□□□ 1.35
COL9A3-203ENST00000462700 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
COL9A3-203ENST00000462700 SRGAP3O43295 1099 aa23.48■■□□□ 1.35
COL9A3-203ENST00000462700 USP17L8P0C7I0 530 aa23.48■■□□□ 1.35
COL9A3-203ENST00000462700 GYG1P46976 350 aa23.48■■□□□ 1.35
COL9A3-203ENST00000462700 KIF4BQ2VIQ3 1234 aa23.48■■□□□ 1.35
COL9A3-203ENST00000462700 RBM26Q5T8P6 1007 aaKnown RBP23.48■■□□□ 1.35
COL9A3-203ENST00000462700 FAM84BQ96KN1 310 aaPredicted RBP23.48■■□□□ 1.35
COL9A3-203ENST00000462700 COPRSQ9NQ92 184 aa23.48■■□□□ 1.35
COL9A3-203ENST00000462700 PA2G4Q9UQ80 394 aaKnown RBP23.48■■□□□ 1.35
COL9A3-203ENST00000462700 HIBADHP31937 336 aaKnown RBP23.47■■□□□ 1.35
COL9A3-203ENST00000462700 PUM3Q15397 648 aaKnown RBP23.47■■□□□ 1.35
COL9A3-203ENST00000462700 DNAJC5GQ8N7S2 189 aa23.47■■□□□ 1.35
COL9A3-203ENST00000462700 FGFR2P21802 821 aa23.46■■□□□ 1.35
COL9A3-203ENST00000462700 PANK1Q8TE04 598 aa23.46■■□□□ 1.35
COL9A3-203ENST00000462700 CREBZFQ9NS37 354 aa23.46■■□□□ 1.35
COL9A3-203ENST00000462700 ZBTB7BO15156 539 aaPredicted RBP23.45■■□□□ 1.34
COL9A3-203ENST00000462700 IL15P40933 162 aaPredicted RBP23.45■■□□□ 1.34
COL9A3-203ENST00000462700 TDRD7Q8NHU6 1098 aaKnown RBP23.45■■□□□ 1.34
COL9A3-203ENST00000462700 MYOZ2Q9NPC6 264 aa23.45■■□□□ 1.34
COL9A3-203ENST00000462700 MS4A1P11836 297 aa23.44■■□□□ 1.34
COL9A3-203ENST00000462700 FBXO33Q7Z6M2 555 aa23.44■■□□□ 1.34
COL9A3-203ENST00000462700 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
COL9A3-203ENST00000462700 GLIS2Q9BZE0 524 aaPredicted RBP23.44■■□□□ 1.34
COL9A3-203ENST00000462700 PNMA6EA0A0J9YXQ4 647 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 TMEM88BA6NKF7 163 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 TRAF5O00463 557 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 SASH1O94885 1247 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
COL9A3-203ENST00000462700 FKBP1AP62942 108 aaKnown RBP23.43■■□□□ 1.34
COL9A3-203ENST00000462700 FMR1Q06787 632 aaKnown RBP eCLIP23.43■■□□□ 1.34
COL9A3-203ENST00000462700 CAVIN4Q5BKX8 364 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 VPS37DQ86XT2 251 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 CERS5Q8N5B7 392 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 LPIN2Q92539 896 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 CEP126Q9P2H0 1117 aa23.43■■□□□ 1.34
COL9A3-203ENST00000462700 FAM205AQ6ZU69 1335 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 SLC5A1P13866 664 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 MMP14P50281 582 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 KIAA0825Q8IV33 1275 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 C1orf115Q9H7X2 142 aa23.42■■□□□ 1.34
COL9A3-203ENST00000462700 JAG2Q9Y219 1238 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms