RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SAMD9LQ8IVG5 1584 aa10.67□□□□□ -0.7
UBE4B-204ENST00000462658 MBD5Q9P267 1494 aa10.67□□□□□ -0.7
UBE4B-204ENST00000462658 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
UBE4B-204ENST00000462658 RARAP10276 462 aa10.66□□□□□ -0.7
UBE4B-204ENST00000462658 ARAFP10398 606 aa10.66□□□□□ -0.7
UBE4B-204ENST00000462658 GJD3Q8N144 294 aa10.66□□□□□ -0.7
UBE4B-204ENST00000462658 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-204ENST00000462658 DHX57Q6P158 1386 aaKnown RBP10.65□□□□□ -0.7
UBE4B-204ENST00000462658 RAPGEF3O95398 923 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 TBC1D8BQ0IIM8 1120 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 TTC16Q8NEE8 873 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 IGFLR1Q9H665 355 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 C11orf16Q9NQ32 467 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 TMEM63CQ9P1W3 806 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 DCTN4Q9UJW0 460 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 FANCAO15360 1455 aa10.65□□□□□ -0.7
UBE4B-204ENST00000462658 ARHGEF5Q12774 1597 aa10.65□□□□□ -0.71
UBE4B-204ENST00000462658 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.71
UBE4B-204ENST00000462658 ADGRL1O94910 1474 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 WIPF1O43516 503 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 C1orf229Q6ZS94 237 aaPredicted RBP10.64□□□□□ -0.71
UBE4B-204ENST00000462658 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 FCHSD1Q86WN1 690 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 ELP3Q9H9T3 547 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 NCOA1Q15788 1441 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 C9orf84Q5VXU9 1444 aa10.64□□□□□ -0.71
UBE4B-204ENST00000462658 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 ARHGEF12Q9NZN5 1544 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 SHANK2Q9UPX8 1470 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 MMP20O60882 483 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
UBE4B-204ENST00000462658 ADH6P28332 368 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 USP5P45974 858 aa10.63□□□□□ -0.71
UBE4B-204ENST00000462658 MARSP56192 900 aaKnown RBP10.63□□□□□ -0.71
UBE4B-204ENST00000462658 AVENQ9NQS1 362 aaPredicted RBP10.63□□□□□ -0.71
UBE4B-204ENST00000462658 SIN3BO75182 1162 aa10.62□□□□□ -0.71
UBE4B-204ENST00000462658 ZMYM4Q5VZL5 1548 aa10.62□□□□□ -0.71
UBE4B-204ENST00000462658 CFAP74Q9C0B2 1584 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 YEATS2Q9ULM3 1422 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 CROCC2H7BZ55 1655 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 CELA2BP08218 269 aaPredicted RBP10.61□□□□□ -0.71
UBE4B-204ENST00000462658 PDE12Q6L8Q7 609 aaKnown RBP10.61□□□□□ -0.71
UBE4B-204ENST00000462658 DHX32Q7L7V1 743 aaKnown RBP10.61□□□□□ -0.71
UBE4B-204ENST00000462658 TMC7Q7Z402 723 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 FAM129BQ96TA1 746 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 RBCK1Q9BYM8 510 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
UBE4B-204ENST00000462658 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 GDF2Q9UK05 429 aaPredicted RBP10.61□□□□□ -0.71
UBE4B-204ENST00000462658 ABCC1P33527 1531 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 ARHGEF40Q8TER5 1519 aa10.61□□□□□ -0.71
UBE4B-204ENST00000462658 CLSPNQ9HAW4 1339 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 POGZQ7Z3K3 1410 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 SCAPERQ9BY12 1400 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 TRAPPC8Q9Y2L5 1435 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 GPR182O15218 404 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 MLLT1Q03111 559 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-204ENST00000462658 XKR5Q6UX68 686 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 SLCO4C1Q6ZQN7 724 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-204ENST00000462658 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-204ENST00000462658 GCC2Q8IWJ2 1684 aa10.6□□□□□ -0.71
UBE4B-204ENST00000462658 MAP3K6O95382 1288 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 IGHA2P01877 340 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 CYP2E1P05181 493 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 BCRP11274 1271 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 EHHADHQ08426 723 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 TTC39BQ5VTQ0 682 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 ZNF385CQ66K41 422 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 DNAJB12Q9NXW2 375 aaKnown RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 TLR7Q9NYK1 1049 aaKnown RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 DENND4BO75064 1496 aaPredicted RBP10.59□□□□□ -0.71
UBE4B-204ENST00000462658 KDM5CP41229 1560 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 ADAMTSL3P82987 1691 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 ADGBQ8N7X0 1667 aa10.59□□□□□ -0.71
UBE4B-204ENST00000462658 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.71
UBE4B-204ENST00000462658 KIF15Q9NS87 1388 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 C1orf127Q8N9H9 656 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 TNFRSF25Q93038 417 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 NIF3L1Q9GZT8 377 aa10.58□□□□□ -0.72
UBE4B-204ENST00000462658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-204ENST00000462658 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 OIP5O43482 229 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms