RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 GGA1Q9UJY5 639 aa16.53■□□□□ 0.24
PBRM1-219ENST00000462207 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
PBRM1-219ENST00000462207 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.23
PBRM1-219ENST00000462207 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.23
PBRM1-219ENST00000462207 MPNDQ8N594 471 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 STAP2Q9UGK3 403 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 BCS1LQ9Y276 419 aa16.52■□□□□ 0.23
PBRM1-219ENST00000462207 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 ATP2B4P23634 1241 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 PHKA1P46020 1223 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 GYG1P46976 350 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 BCAMP50895 628 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
PBRM1-219ENST00000462207 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
PBRM1-219ENST00000462207 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
PBRM1-219ENST00000462207 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
PBRM1-219ENST00000462207 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
PBRM1-219ENST00000462207 GPATCH3Q96I76 525 aa16.5■□□□□ 0.23
PBRM1-219ENST00000462207 OSBPL3Q9H4L5 887 aa16.5■□□□□ 0.23
PBRM1-219ENST00000462207 TTC41PQ6P2S7 1318 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 SCARF1Q14162 830 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 AOX1Q06278 1338 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
PBRM1-219ENST00000462207 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
PBRM1-219ENST00000462207 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
PBRM1-219ENST00000462207 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
PBRM1-219ENST00000462207 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
PBRM1-219ENST00000462207 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
PBRM1-219ENST00000462207 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
PBRM1-219ENST00000462207 MED23Q9ULK4 1368 aa16.48■□□□□ 0.23
PBRM1-219ENST00000462207 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
PBRM1-219ENST00000462207 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
PBRM1-219ENST00000462207 ATP5JP18859 108 aa16.47■□□□□ 0.23
PBRM1-219ENST00000462207 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
PBRM1-219ENST00000462207 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
PBRM1-219ENST00000462207 EDC3Q96F86 508 aaKnown RBP16.47■□□□□ 0.23
PBRM1-219ENST00000462207 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
PBRM1-219ENST00000462207 ERC2O15083 957 aa16.46■□□□□ 0.23
PBRM1-219ENST00000462207 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
PBRM1-219ENST00000462207 MCAMP43121 646 aa16.46■□□□□ 0.23
PBRM1-219ENST00000462207 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
PBRM1-219ENST00000462207 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
PBRM1-219ENST00000462207 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
PBRM1-219ENST00000462207 FBXO33Q7Z6M2 555 aa16.46■□□□□ 0.23
PBRM1-219ENST00000462207 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
PBRM1-219ENST00000462207 RTFDC1Q9BY42 306 aaPredicted RBP16.46■□□□□ 0.23
PBRM1-219ENST00000462207 FER1L6Q2WGJ9 1857 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
PBRM1-219ENST00000462207 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 NFKBIEO00221 500 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 AOC3Q16853 763 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
PBRM1-219ENST00000462207 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
PBRM1-219ENST00000462207 AKAP11Q9UKA4 1901 aa16.44■□□□□ 0.22
PBRM1-219ENST00000462207 COL4A5P29400 1685 aa16.44■□□□□ 0.22
PBRM1-219ENST00000462207 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
PBRM1-219ENST00000462207 DOK7Q18PE1 504 aa16.44■□□□□ 0.22
PBRM1-219ENST00000462207 HAUS7Q99871 368 aa16.44■□□□□ 0.22
PBRM1-219ENST00000462207 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
PBRM1-219ENST00000462207 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
PBRM1-219ENST00000462207 SDSP20132 328 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 ZAP70P43403 619 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 RASSF7Q02833 373 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
PBRM1-219ENST00000462207 PSMD1Q99460 953 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 EYA3Q99504 573 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.43■□□□□ 0.22
PBRM1-219ENST00000462207 ZC3H12CQ9C0D7 883 aaKnown RBP16.43■□□□□ 0.22
PBRM1-219ENST00000462207 ANTXR1Q9H6X2 564 aa16.43■□□□□ 0.22
PBRM1-219ENST00000462207 GOLIM4O00461 696 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 KIAA2012Q0VF49 1180 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 RILPL2Q969X0 211 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 TAOK3Q9H2K8 898 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 CD209Q9NNX6 404 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 MYH13Q9UKX3 1938 aa16.42■□□□□ 0.22
PBRM1-219ENST00000462207 CHAF1AQ13111 956 aaPredicted RBP16.41■□□□□ 0.22
PBRM1-219ENST00000462207 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
PBRM1-219ENST00000462207 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
PBRM1-219ENST00000462207 GNL3LQ9NVN8 582 aaKnown RBP16.41■□□□□ 0.22
PBRM1-219ENST00000462207 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
PBRM1-219ENST00000462207 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms