RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 INTS3Q68E01 1043 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 TRPM4Q8TD43 1214 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 TEX13AQ9BXU3 409 aaPredicted RBP7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 H7C1D1 291 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 GPR25O00155 361 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 PPIP5K2O43314 1243 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 TRAK2O60296 914 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 EN2P19622 333 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 FOXK1P85037 733 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 SULT6B1Q6IMI4 303 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 CLEC4GQ6UXB4 293 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 KRT26Q7Z3Y9 468 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
SMARCC1-204ENST00000462198 SNED1Q8TER0 1413 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 BHMG1C9JSJ3 638 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 GTF2E1P29083 439 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 TNIP1Q15025 636 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 AOC3Q16853 763 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 TTC5Q8N0Z6 440 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 SUPT16HQ9Y5B9 1047 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 PAPPA2Q9BXP8 1791 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 SCN7AQ01118 1682 aa7.86□□□□□ -1.15
SMARCC1-204ENST00000462198 COL6A3P12111 3177 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 H0YGN5 161 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 LCE2BO14633 110 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 FKTNO75072 461 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 RAD17O75943 681 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 HIC1Q14526 733 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 NOM1Q5C9Z4 860 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 SAMD7Q7Z3H4 446 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 NECTIN2Q92692 538 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 CLUAP1Q96AJ1 413 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 DCPSQ96C86 337 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 VPS33BQ9H267 617 aa7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 NIP7Q9Y221 180 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCC1-204ENST00000462198 ADM5C9JUS6 153 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 OSBPP22059 807 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 PPP2R1AP30153 589 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 TM4SF4P48230 202 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 MCM6Q14566 821 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 RALBP1Q15311 655 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 CRY2Q49AN0 593 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 SLC51AQ86UW1 340 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 ZNF652Q9Y2D9 606 aa7.84□□□□□ -1.15
SMARCC1-204ENST00000462198 CDHR2Q9BYE9 1310 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 FECHP22830 423 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 HOXA10P31260 410 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 PIP4K2AP48426 406 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 TBC1D10BQ4KMP7 808 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 RPGRQ92834 1020 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 WNT2BQ93097 391 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 PKNOX2Q96KN3 472 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 R3HDMLQ9H3Y0 253 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 RBM27Q9P2N5 1060 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 TRIM17Q9Y577 477 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 HEG1Q9ULI3 1381 aa7.83□□□□□ -1.16
SMARCC1-204ENST00000462198 UBR2Q8IWV8 1755 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 PRAMEF22A3QJZ6 481 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 PPEF1O14829 653 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 ANP32CO43423 234 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 MS4A1P11836 297 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 GIGYF2Q6Y7W6 1299 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 SUPT20HQ8NEM7 779 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 RBM17Q96I25 401 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 CRAMP1Q96RY5 1269 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 USP16Q9Y5T5 823 aa7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 RBBP6Q7Z6E9 1792 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-204ENST00000462198 MYBBP1AQ9BQG0 1328 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 EGFRP00533 1210 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 TTLL12Q14166 644 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 NUTM1Q86Y26 1132 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 SULF1Q8IWU6 871 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 DPF2Q92785 391 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 CDCA5Q96FF9 252 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 FMNL2Q96PY5 1086 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 PRKRIP1Q9H875 184 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 MRC1P22897 1456 aa7.81□□□□□ -1.16
SMARCC1-204ENST00000462198 GOLGA8CPA6NN73 597 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 YDJCA8MPS7 323 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 UBE2Q2LH0YL09 131 aa7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 DIAPH1O60610 1272 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-204ENST00000462198 HLFQ16534 295 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms