RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KMT5BQ4FZB7 885 aa21.58■■□□□ 1.05
HPS3-204ENST00000462030 UBE3BQ7Z3V4 1068 aa21.58■■□□□ 1.05
HPS3-204ENST00000462030 AFDNP55196 1824 aaKnown RBP21.58■■□□□ 1.04
HPS3-204ENST00000462030 ADAMTS7Q9UKP4 1686 aa21.58■■□□□ 1.04
HPS3-204ENST00000462030 CEP57L1Q8IYX8 460 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 ZNF396Q96N95 335 aaPredicted RBP21.57■■□□□ 1.04
HPS3-204ENST00000462030 MORC2Q9Y6X9 1032 aaPredicted RBP21.57■■□□□ 1.04
HPS3-204ENST00000462030 SALL1Q9NSC2 1324 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 NBPF11Q86T75 865 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 KBTBD3Q8NAB2 608 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 SH3TC1Q8TE82 1336 aa21.57■■□□□ 1.04
HPS3-204ENST00000462030 HMGB1P09429 215 aaKnown RBP21.56■■□□□ 1.04
HPS3-204ENST00000462030 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
HPS3-204ENST00000462030 CHST3Q7LGC8 479 aa21.56■■□□□ 1.04
HPS3-204ENST00000462030 ERBB3P21860 1342 aa21.56■■□□□ 1.04
HPS3-204ENST00000462030 ZNF397Q8NF99 534 aaPredicted RBP21.56■■□□□ 1.04
HPS3-204ENST00000462030 ANKRD13DQ6ZTN6 518 aa21.55■■□□□ 1.04
HPS3-204ENST00000462030 AGXT2Q9BYV1 514 aa21.55■■□□□ 1.04
HPS3-204ENST00000462030 PCDHA7Q9UN72 937 aa21.55■■□□□ 1.04
HPS3-204ENST00000462030 ELF2Q15723 593 aa21.55■■□□□ 1.04
HPS3-204ENST00000462030 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
HPS3-204ENST00000462030 ZNF771Q7L3S4 317 aaPredicted RBP21.55■■□□□ 1.04
HPS3-204ENST00000462030 FMR1NBQ8N0W7 255 aaPredicted RBP21.55■■□□□ 1.04
HPS3-204ENST00000462030 CAMTA1Q9Y6Y1 1673 aa21.55■■□□□ 1.04
HPS3-204ENST00000462030 A0A1B0GVL5 298 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 GOLIM4O00461 696 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 ABCC6O95255 1503 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 E7EWF7 191 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 ATP5J2-PTCD1G3V325 749 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 PTCD1O75127 700 aaKnown RBP21.54■■□□□ 1.04
HPS3-204ENST00000462030 GABPB1Q06547 395 aaPredicted RBP21.54■■□□□ 1.04
HPS3-204ENST00000462030 ATL3Q6DD88 541 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 FBXO38Q6PIJ6 1188 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 LRP10Q7Z4F1 713 aa21.54■■□□□ 1.04
HPS3-204ENST00000462030 MRPS27Q92552 414 aaKnown RBP21.54■■□□□ 1.04
HPS3-204ENST00000462030 CARMIL3Q8ND23 1372 aa21.53■■□□□ 1.04
HPS3-204ENST00000462030 PDIA3P30101 505 aaKnown RBP21.53■■□□□ 1.04
HPS3-204ENST00000462030 ERO1AQ96HE7 468 aa21.53■■□□□ 1.04
HPS3-204ENST00000462030 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
HPS3-204ENST00000462030 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
HPS3-204ENST00000462030 KDM6AO15550 1401 aaPredicted RBP21.53■■□□□ 1.04
HPS3-204ENST00000462030 PALLDQ8WX93 1383 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.04
HPS3-204ENST00000462030 NDUFA8P51970 172 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 DPCR1Q3MIW9 517 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 NFATC2IPQ8NCF5 419 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 SDF4Q9BRK5 362 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 DSCC1Q9BVC3 393 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 RGPD5Q99666 1765 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 OTUD7BQ6GQQ9 843 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 NAT10Q9H0A0 1025 aaKnown RBP21.52■■□□□ 1.04
HPS3-204ENST00000462030 OSBPL5Q9H0X9 879 aaPredicted RBP21.52■■□□□ 1.04
HPS3-204ENST00000462030 KCND1Q9NSA2 647 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
HPS3-204ENST00000462030 A0A087WZG4 1122 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 SLFN14P0C7P3 912 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 GSDMDP57764 484 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 E4F1Q66K89 784 aaPredicted RBP21.51■■□□□ 1.03
HPS3-204ENST00000462030 SLIT3O75094 1523 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 SLU7O95391 586 aaKnown RBP21.51■■□□□ 1.03
HPS3-204ENST00000462030 HSPD1P10809 573 aaKnown RBP21.51■■□□□ 1.03
HPS3-204ENST00000462030 SYTL4Q96C24 671 aaPredicted RBP21.51■■□□□ 1.03
HPS3-204ENST00000462030 NEUROD6Q96NK8 337 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 HELLSQ9NRZ9 838 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 SCN11AQ9UI33 1791 aa21.51■■□□□ 1.03
HPS3-204ENST00000462030 NEDD4P46934 1319 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 ADALQ6DHV7 355 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 XPO4Q9C0E2 1151 aaKnown RBP21.5■■□□□ 1.03
HPS3-204ENST00000462030 GPHNQ9NQX3 736 aaPredicted RBP21.5■■□□□ 1.03
HPS3-204ENST00000462030 FER1L4A9Z1Z3 1794 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 ARFGEF2Q9Y6D5 1785 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 ZMYM1Q5SVZ6 1142 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 ARMCX5Q6P1M9 558 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 KRT222Q8N1A0 295 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 RTEL1Q9NZ71 1219 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 CLIC4Q9Y696 253 aa21.5■■□□□ 1.03
HPS3-204ENST00000462030 NPHP1O15259 732 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 SMC2O95347 1197 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 TTLL5Q6EMB2 1281 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 TMC6Q7Z403 805 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 ZNF274Q96GC6 653 aaPredicted RBP21.49■■□□□ 1.03
HPS3-204ENST00000462030 IFNKQ9P0W0 207 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 KIAA1468Q9P260 1216 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 MAST3O60307 1309 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 CASP7P55210 303 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 LINC00301Q8NCQ3 95 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
HPS3-204ENST00000462030 TIMM10P62072 90 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 PPP1R13BQ96KQ4 1090 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 ORAI2Q96SN7 254 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 IMPACTQ9P2X3 320 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 BIN1O00499 593 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 POLR3DP05423 398 aaPredicted RBP21.48■■□□□ 1.03
HPS3-204ENST00000462030 LRRN4CLQ8ND94 238 aa21.48■■□□□ 1.03
HPS3-204ENST00000462030 A0A1W2PQ27 194 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 A0A1W2PQ64 194 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 A0A1W2PQD8 194 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms