RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RTF1Q92541 710 aaKnown RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 GCC1Q96CN9 775 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 ATP6V0A2Q9Y487 856 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 TERF2Q15554 542 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 C17orf53Q8N3J3 647 aaPredicted RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 TNPO1Q92973 898 aaKnown RBP7.08□□□□□ -1.28
CLK1-207ENST00000461981 PRIMPOLQ96LW4 560 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 NCAPGQ9BPX3 1015 aa7.08□□□□□ -1.28
CLK1-207ENST00000461981 ARAP2Q8WZ64 1704 aa7.07□□□□□ -1.28
CLK1-207ENST00000461981 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
CLK1-207ENST00000461981 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
CLK1-207ENST00000461981 RAD51AP2Q09MP3 1159 aa7.07□□□□□ -1.28
CLK1-207ENST00000461981 GIGYF2Q6Y7W6 1299 aaKnown RBP7.07□□□□□ -1.28
CLK1-207ENST00000461981 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
CLK1-207ENST00000461981 FOXN1O15353 648 aa7.07□□□□□ -1.28
CLK1-207ENST00000461981 DDX21Q9NR30 783 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLK1-207ENST00000461981 NOP2P46087 812 aaKnown RBP7.06□□□□□ -1.28
CLK1-207ENST00000461981 TPRNQ4KMQ1 711 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 NIM1KQ8IY84 436 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 FEZ1Q99689 392 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 CCDC39Q9UFE4 941 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 ZNRF3Q9ULT6 936 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 MCM5P33992 734 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 GTF2F1P35269 517 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLK1-207ENST00000461981 VEGFBP49765 207 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 NOGQ13253 232 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 FAM212AQ96EL1 285 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 GBP4Q96PP9 640 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 EYA3Q99504 573 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 RBSNQ9H1K0 784 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 ZBTB12Q9Y330 459 aaPredicted RBP7.06□□□□□ -1.28
CLK1-207ENST00000461981 DDX49Q9Y6V7 483 aaKnown RBP7.06□□□□□ -1.28
CLK1-207ENST00000461981 AKAP11Q9UKA4 1901 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 C21orf2O43822 256 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 CLSTN1O94985 981 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 NTSR2O95665 410 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 SATB1Q01826 763 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 SF3B3Q15393 1217 aaKnown RBP7.06□□□□□ -1.28
CLK1-207ENST00000461981 NFE2L2Q16236 605 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
CLK1-207ENST00000461981 CNTROBQ8N137 903 aa7.06□□□□□ -1.28
CLK1-207ENST00000461981 HNRNPH2P55795 449 aaKnown RBP7.05□□□□□ -1.28
CLK1-207ENST00000461981 ICE2Q659A1 982 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 ABHD8Q96I13 439 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 PDLIM2Q96JY6 352 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 TBC1D32Q96NH3 1257 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 FOXD4L1Q9NU39 408 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 GPRC5DQ9NZD1 345 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 ZNF541Q9H0D2 1346 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 PPEF1O14829 653 aaPredicted RBP7.05□□□□□ -1.28
CLK1-207ENST00000461981 FKBP1AP62942 108 aaKnown RBP7.05□□□□□ -1.28
CLK1-207ENST00000461981 SART3Q15020 963 aaKnown RBP7.05□□□□□ -1.28
CLK1-207ENST00000461981 RASSF4Q9H2L5 321 aa7.05□□□□□ -1.28
CLK1-207ENST00000461981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLK1-207ENST00000461981 MYO3BQ8WXR4 1341 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 MFAP1P55081 439 aaKnown RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 C10orf67Q8IYJ2 551 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 RPGRQ92834 1020 aaKnown RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 DRC1Q96MC2 740 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 BEGAINQ9BUH8 593 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 COL4A1P02462 1669 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 EIF4A1P60842 406 aaKnown RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 CAVIN1Q6NZI2 390 aaKnown RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 SPINK5Q9NQ38 1064 aaPredicted RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 GRAPQ13588 217 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 CDC37L1Q7L3B6 337 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 GRAPLQ8TC17 118 aaPredicted RBP7.04□□□□□ -1.28
CLK1-207ENST00000461981 CAPNS2Q96L46 248 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 PPP2R3BQ9Y5P8 575 aa7.04□□□□□ -1.28
CLK1-207ENST00000461981 COL4A5P29400 1685 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 TAF1P21675 1872 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 TDO2P48775 406 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 ZNF280AP59817 542 aaPredicted RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 NBPF20Q3BBV1 942 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 LRP10Q7Z4F1 713 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 RNF214Q8ND24 703 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 AGBL3Q8NEM8 1001 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 NLRP3Q96P20 1036 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 UTP14AQ9BVJ6 771 aaKnown RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 NIP7Q9Y221 180 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLK1-207ENST00000461981 MYH3P11055 1940 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 RIOK3O14730 519 aaKnown RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 TRIM66O15016 1216 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 PPP2R1AP30153 589 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 MLLT1Q03111 559 aaPredicted RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 SLC39A6Q13433 755 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 CIAPIN1Q6FI81 312 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 HSCBQ8IWL3 235 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 NBPF15Q8N660 670 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 CALR3Q96L12 384 aaKnown RBP7.03□□□□□ -1.28
CLK1-207ENST00000461981 PLEKHF1Q96S99 279 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 ST7Q9NRC1 585 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 ABCC12Q96J65 1359 aa7.03□□□□□ -1.28
CLK1-207ENST00000461981 A0A1B0GUL6 1792 aa7.02□□□□□ -1.29
CLK1-207ENST00000461981 DDNO94850 711 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms