RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
BRCA1-207ENST00000461798 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
BRCA1-207ENST00000461798 LEMD3Q9Y2U8 911 aa11.66□□□□□ -0.54
BRCA1-207ENST00000461798 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
BRCA1-207ENST00000461798 F6X3S4 739 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 G3V3G9 751 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 ITGA6P23229 1130 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 IGHMBP2P38935 993 aaKnown RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 CCT4P50991 539 aaKnown RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 FOXO4P98177 505 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 HHIPL1Q96JK4 782 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 GMLQ99445 158 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 GLIS2Q9BZE0 524 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 ANKRD2Q9GZV1 360 aa11.65□□□□□ -0.54
BRCA1-207ENST00000461798 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
BRCA1-207ENST00000461798 MED23Q9ULK4 1368 aa11.65□□□□□ -0.55
BRCA1-207ENST00000461798 WDR33Q9C0J8 1336 aaKnown RBP11.64□□□□□ -0.55
BRCA1-207ENST00000461798 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-207ENST00000461798 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
BRCA1-207ENST00000461798 EGFRP00533 1210 aa11.64□□□□□ -0.55
BRCA1-207ENST00000461798 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
BRCA1-207ENST00000461798 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-207ENST00000461798 SAPCD2Q86UD0 394 aa11.64□□□□□ -0.55
BRCA1-207ENST00000461798 CACNA1FO60840 1977 aa11.64□□□□□ -0.55
BRCA1-207ENST00000461798 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 E9PSI1 815 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 GRM8O00222 908 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 CELF2O95319 508 aaKnown RBP11.63□□□□□ -0.55
BRCA1-207ENST00000461798 ECE1P42892 770 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 TBC1D10BQ4KMP7 808 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-207ENST00000461798 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 MPHOSPH8Q99549 860 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 COA1Q9GZY4 146 aa11.63□□□□□ -0.55
BRCA1-207ENST00000461798 ZNF804BA4D1E1 1349 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 FOXN1O15353 648 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 MAP2K2P36507 400 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 MMP14P50281 582 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-207ENST00000461798 SLFN5Q08AF3 891 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
BRCA1-207ENST00000461798 STRIP1Q5VSL9 837 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
BRCA1-207ENST00000461798 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
BRCA1-207ENST00000461798 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
BRCA1-207ENST00000461798 CCER2I3L3R5 266 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-207ENST00000461798 CHRNDQ07001 517 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
BRCA1-207ENST00000461798 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 DACT2Q5SW24 774 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 MAMSTRQ6ZN01 415 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 TRMT2AQ8IZ69 625 aaKnown RBP11.61□□□□□ -0.55
BRCA1-207ENST00000461798 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
BRCA1-207ENST00000461798 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
BRCA1-207ENST00000461798 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-207ENST00000461798 UTYO14607 1347 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 PCNTO95613 3336 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 SCN9AQ15858 1988 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 AIDAQ96BJ3 306 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-207ENST00000461798 MYOZ2Q9NPC6 264 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 PTPRCP08575 1304 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
BRCA1-207ENST00000461798 ATMINO43313 823 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-207ENST00000461798 C7P10643 843 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 SCARF1Q14162 830 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 TNS4Q8IZW8 715 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 SSH1Q8WYL5 1049 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
BRCA1-207ENST00000461798 MYH3P11055 1940 aa11.58□□□□□ -0.55
BRCA1-207ENST00000461798 ADM5C9JUS6 153 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 KLRK1P26718 216 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 TTLL5Q6EMB2 1281 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-207ENST00000461798 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 GGA3Q9NZ52 723 aa11.58□□□□□ -0.56
BRCA1-207ENST00000461798 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms