RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 H7C1D1 291 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 EYA2O00167 538 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 KLRK1P26718 216 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 EPS15P42566 896 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 SIL1Q9H173 461 aa13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-213ENST00000461577 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
TRAPPC12-213ENST00000461577 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 CIAO1O76071 339 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 PDE8BO95263 885 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 MTX1Q13505 466 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 DPF2Q92785 391 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 COPRSQ9NQ92 184 aa13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-213ENST00000461577 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 HSPA6P17066 643 aa13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 TTLL5Q6EMB2 1281 aa13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 AGBL3Q8NEM8 1001 aa13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
TRAPPC12-213ENST00000461577 IRS2Q9Y4H2 1338 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 SLC5A1P13866 664 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 GTF2IP78347 998 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 PUM3Q15397 648 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 VGLL2Q8N8G2 317 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
TRAPPC12-213ENST00000461577 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 IL1R1P14778 569 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 GYG1P46976 350 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
TRAPPC12-213ENST00000461577 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 FGFR2P21802 821 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 LPIN2Q92539 896 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 ZNF609O15014 1411 aa13.13□□□□□ -0.31
TRAPPC12-213ENST00000461577 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 APLP1P51693 650 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 GMLQ99445 158 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
TRAPPC12-213ENST00000461577 SASH1O94885 1247 aa13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 POLA2Q14181 598 aa13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
TRAPPC12-213ENST00000461577 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 MMP14P50281 582 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 BCAMP50895 628 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 HIRAP54198 1017 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms