RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 KDF1Q8NAX2 398 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-206ENST00000461574 FLAD1Q8NFF5 587 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 ZCRB1Q8TBF4 217 aaKnown RBP7.12□□□□□ -1.27
BRCA1-206ENST00000461574 WDR90Q96KV7 1748 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 SMG6Q86US8 1419 aaKnown RBP7.11□□□□□ -1.27
BRCA1-206ENST00000461574 NSD3Q9BZ95 1437 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 NSD2O96028 1365 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 SBNO2Q9Y2G9 1366 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 RNF225M0QZC1 329 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-206ENST00000461574 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 ADH1AP07327 375 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 AMPHP49418 695 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 IP6K1Q92551 441 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 TERF2IPQ9NYB0 399 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 MEGF6O75095 1541 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 UBR3Q6ZT12 1888 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 CD163L1Q9NR16 1453 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 ITGB4P16144 1822 aa7.11□□□□□ -1.27
BRCA1-206ENST00000461574 USP17L8P0C7I0 530 aa7.1□□□□□ -1.27
BRCA1-206ENST00000461574 PTGIRP43119 386 aa7.1□□□□□ -1.27
BRCA1-206ENST00000461574 DZIP3Q86Y13 1208 aaKnown RBP7.1□□□□□ -1.27
BRCA1-206ENST00000461574 RAPGEF4Q8WZA2 1011 aa7.1□□□□□ -1.27
BRCA1-206ENST00000461574 L3MBTL2Q969R5 705 aa7.1□□□□□ -1.27
BRCA1-206ENST00000461574 TOGARAM1Q9Y4F4 1720 aa7.1□□□□□ -1.27
BRCA1-206ENST00000461574 A0A1W2PP64 1363 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 PALLDQ8WX93 1383 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 PCNTO95613 3336 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 ESPNB1AK53 854 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 C16orf71Q8IYS4 520 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-206ENST00000461574 DDRGK1Q96HY6 314 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 COG3Q96JB2 828 aa7.09□□□□□ -1.27
BRCA1-206ENST00000461574 CUEDC1Q9NWM3 386 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-206ENST00000461574 N4BP2Q86UW6 1770 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-206ENST00000461574 CICQ96RK0 1608 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-206ENST00000461574 MAP3K19Q56UN5 1328 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 PCDH11XQ9BZA7 1347 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 PCDH11YQ9BZA8 1340 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 TOMM70O94826 608 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 TATP17735 454 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-206ENST00000461574 HOXC9P31274 260 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 IRS1P35568 1242 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 MPRIPQ6WCQ1 1025 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 SLC12A5Q9H2X9 1139 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 RTL1A6NKG5 1358 aa7.08□□□□□ -1.28
BRCA1-206ENST00000461574 CGNL1Q0VF96 1302 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 KIF20BQ96Q89 1820 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 GAS6Q14393 721 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 LYPD4Q6UWN0 246 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 USHBP1Q8N6Y0 703 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 PNMA1Q8ND90 353 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 CARD11Q9BXL7 1154 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 CYLDQ9NQC7 956 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 PKD1L3Q7Z443 1732 aa7.07□□□□□ -1.28
BRCA1-206ENST00000461574 KIF13BQ9NQT8 1826 aa7.06□□□□□ -1.28
BRCA1-206ENST00000461574 RHOQP17081 205 aa7.06□□□□□ -1.28
BRCA1-206ENST00000461574 RFC5P40937 340 aa7.06□□□□□ -1.28
BRCA1-206ENST00000461574 MARSP56192 900 aaKnown RBP7.06□□□□□ -1.28
BRCA1-206ENST00000461574 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
BRCA1-206ENST00000461574 SMARCC1Q92922 1105 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-206ENST00000461574 BCS1LQ9Y276 419 aa7.06□□□□□ -1.28
BRCA1-206ENST00000461574 TNRC6CQ9HCJ0 1690 aaKnown RBP7.06□□□□□ -1.28
BRCA1-206ENST00000461574 KIAA1551Q9HCM1 1747 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 SSFA2P28290 1259 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 SRSF11Q05519 484 aaKnown RBP7.05□□□□□ -1.28
BRCA1-206ENST00000461574 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 ARHGAP27Q6ZUM4 889 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 TNS4Q8IZW8 715 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 TRIM34Q9BYJ4 488 aa7.05□□□□□ -1.28
BRCA1-206ENST00000461574 PXDNLA1KZ92 1463 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 BRCA1P38398 1863 aaKnown RBP7.04□□□□□ -1.28
BRCA1-206ENST00000461574 ARFGEF1Q9Y6D6 1849 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 MMP10P09238 476 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 FBLN1P23142 703 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-206ENST00000461574 RRS1Q15050 365 aaKnown RBP7.04□□□□□ -1.28
BRCA1-206ENST00000461574 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 SIN3AQ96ST3 1273 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 NMRK2Q9NPI5 230 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-206ENST00000461574 PLEKHG2Q9H7P9 1386 aa7.04□□□□□ -1.28
BRCA1-206ENST00000461574 MAP2P11137 1827 aaKnown RBP7.04□□□□□ -1.28
BRCA1-206ENST00000461574 KDM2BQ8NHM5 1336 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-206ENST00000461574 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-206ENST00000461574 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 DNAJC5GQ8N7S2 189 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 KLRG1Q96E93 195 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 TMOD3Q9NYL9 352 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 C4AP0C0L4 1744 aa7.03□□□□□ -1.28
BRCA1-206ENST00000461574 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 A0A0G2JLW4 131 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 GPR25O00155 361 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 SIK1P57059 783 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 TGFB2P61812 414 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 HTRA3P83110 453 aa7.02□□□□□ -1.29
BRCA1-206ENST00000461574 MAP3K10Q02779 954 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms