RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 TTC39AQ5SRH9 613 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 ZC3H12CQ9C0D7 883 aaKnown RBP11.96□□□□□ -0.49
C9orf78-203ENST00000461539 ECHDC1Q9NTX5 307 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 LAMB2P55268 1798 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 G3V3G9 751 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 HIBADHP31937 336 aaKnown RBP11.95□□□□□ -0.5
C9orf78-203ENST00000461539 PHKA1P46020 1223 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 BCAMP50895 628 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 PDE1AP54750 535 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
C9orf78-203ENST00000461539 WASHC4Q2M389 1173 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 CCDC102BQ68D86 513 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 FAM84BQ96KN1 310 aaPredicted RBP11.95□□□□□ -0.5
C9orf78-203ENST00000461539 RTFDC1Q9BY42 306 aaPredicted RBP11.95□□□□□ -0.5
C9orf78-203ENST00000461539 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
C9orf78-203ENST00000461539 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
C9orf78-203ENST00000461539 TTC41PQ6P2S7 1318 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 ERC2O15083 957 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 PPIP5K2O43314 1243 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 FRAT2O75474 233 aaPredicted RBP11.94□□□□□ -0.5
C9orf78-203ENST00000461539 UQCRFS1P1P0C7P4 283 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 GPR162Q16538 588 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 C15orf52Q6ZUT6 534 aaKnown RBP11.94□□□□□ -0.5
C9orf78-203ENST00000461539 ZNF804AQ7Z570 1209 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 PSMD1Q99460 953 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
C9orf78-203ENST00000461539 STAP2Q9UGK3 403 aa11.94□□□□□ -0.5
C9orf78-203ENST00000461539 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 SALL3Q9BXA9 1300 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 NFKBIEO00221 500 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
C9orf78-203ENST00000461539 ATP5JP18859 108 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 AOC3Q16853 763 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
C9orf78-203ENST00000461539 IQSEC3Q9UPP2 1182 aaPredicted RBP11.93□□□□□ -0.5
C9orf78-203ENST00000461539 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 IRS2Q9Y4H2 1338 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
C9orf78-203ENST00000461539 YBX3P16989 372 aaKnown RBP eCLIP11.92□□□□□ -0.55e-8■■■□□ 16.9
C9orf78-203ENST00000461539 RASSF7Q02833 373 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 PI4K2BQ8TCG2 481 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 DNAJC2Q99543 621 aaKnown RBP11.92□□□□□ -0.5
C9orf78-203ENST00000461539 COA1Q9GZY4 146 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
C9orf78-203ENST00000461539 AOX1Q06278 1338 aa11.91□□□□□ -0.5
C9orf78-203ENST00000461539 ARID4AP29374 1257 aaPredicted RBP11.91□□□□□ -0.5
C9orf78-203ENST00000461539 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
C9orf78-203ENST00000461539 CHAF1AQ13111 956 aaPredicted RBP11.91□□□□□ -0.5
C9orf78-203ENST00000461539 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
C9orf78-203ENST00000461539 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
C9orf78-203ENST00000461539 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
C9orf78-203ENST00000461539 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
C9orf78-203ENST00000461539 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
C9orf78-203ENST00000461539 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
C9orf78-203ENST00000461539 MCAMP43121 646 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 SCARF1Q14162 830 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 PI16Q6UXB8 463 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 NIM1KQ8IY84 436 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 TDRD7Q8NHU6 1098 aaKnown RBP11.9□□□□□ -0.5
C9orf78-203ENST00000461539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
C9orf78-203ENST00000461539 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
C9orf78-203ENST00000461539 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 SEMA3EO15041 775 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 ECE2O60344 883 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 IL1R1P14778 569 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 ZAP70P43403 619 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 HAUS7Q99871 368 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 JAG2Q9Y219 1238 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
C9orf78-203ENST00000461539 GOLIM4O00461 696 aa11.88□□□□□ -0.51
C9orf78-203ENST00000461539 GSPT1P15170 499 aaKnown RBP11.88□□□□□ -0.51
C9orf78-203ENST00000461539 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
C9orf78-203ENST00000461539 RILPL2Q969X0 211 aa11.88□□□□□ -0.51
C9orf78-203ENST00000461539 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
C9orf78-203ENST00000461539 LMNB1P20700 586 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 GTF2IP78347 998 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
C9orf78-203ENST00000461539 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms