RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 TP53INP1Q96A56 240 aa8.45□□□□□ -1.06
UBA3-204ENST00000461522 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
UBA3-204ENST00000461522 ADAM19Q9H013 955 aa8.45□□□□□ -1.06
UBA3-204ENST00000461522 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 NFKBIEO00221 500 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 TM4SF5O14894 197 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 TNFRSF21O75509 655 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 ACPPP15309 386 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 PTPRAP18433 802 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 EHHADHQ08426 723 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 GJD3Q8N144 294 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
UBA3-204ENST00000461522 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
UBA3-204ENST00000461522 ICMTO60725 284 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 EPHA1P21709 976 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 MEGF10Q96KG7 1140 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 AKTIPQ9H8T0 292 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
UBA3-204ENST00000461522 ECM1Q16610 540 aa8.42□□□□□ -1.06
UBA3-204ENST00000461522 TXNDC11Q6PKC3 985 aa8.42□□□□□ -1.06
UBA3-204ENST00000461522 Q6ZS46 218 aa8.42□□□□□ -1.06
UBA3-204ENST00000461522 RETREG2Q8NC44 543 aa8.42□□□□□ -1.06
UBA3-204ENST00000461522 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
UBA3-204ENST00000461522 SH2B1Q9NRF2 756 aaPredicted RBP8.42□□□□□ -1.06
UBA3-204ENST00000461522 EREGO14944 169 aa8.41□□□□□ -1.06
UBA3-204ENST00000461522 PHACTR2O75167 634 aa8.41□□□□□ -1.06
UBA3-204ENST00000461522 SERPINB4P48594 390 aa8.41□□□□□ -1.06
UBA3-204ENST00000461522 FOXD4L6Q3SYB3 417 aaPredicted RBP8.41□□□□□ -1.06
UBA3-204ENST00000461522 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
UBA3-204ENST00000461522 FOXD4L3Q6VB84 417 aaPredicted RBP8.41□□□□□ -1.06
UBA3-204ENST00000461522 DZIP1LQ8IYY4 767 aaKnown RBP8.41□□□□□ -1.06
UBA3-204ENST00000461522 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
UBA3-204ENST00000461522 PDE2AO00408 941 aaPredicted RBP8.4□□□□□ -1.06
UBA3-204ENST00000461522 FSCN2O14926 492 aa8.4□□□□□ -1.06
UBA3-204ENST00000461522 ALX3O95076 343 aa8.4□□□□□ -1.06
UBA3-204ENST00000461522 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
UBA3-204ENST00000461522 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.4□□□□□ -1.06
UBA3-204ENST00000461522 TMEM102Q8N9M5 508 aaPredicted RBP8.4□□□□□ -1.06
UBA3-204ENST00000461522 KLHL23Q8NBE8 558 aa8.4□□□□□ -1.06
UBA3-204ENST00000461522 HHIPQ96QV1 700 aa8.4□□□□□ -1.06
UBA3-204ENST00000461522 H3BRB1 525 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 TRPA1O75762 1119 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 CDC25BP30305 580 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
UBA3-204ENST00000461522 KCNK4Q9NYG8 393 aa8.39□□□□□ -1.07
UBA3-204ENST00000461522 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 H3BRJ5 948 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 WISP1O95388 367 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 EDN3P14138 238 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 ZMYM1Q5SVZ6 1142 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 Q8N3U1 123 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 WNT8BQ93098 351 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 OSMRQ99650 979 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 ZKSCAN3Q9BRR0 538 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
UBA3-204ENST00000461522 CABP4P57796 275 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 ARHGAP4P98171 946 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 PDE4CQ08493 712 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 AGGF1Q8N302 714 aaeCLIP8.37□□□□□ -1.07
UBA3-204ENST00000461522 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 ZFYVE28Q9HCC9 887 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 AMOTL2Q9Y2J4 779 aa8.37□□□□□ -1.07
UBA3-204ENST00000461522 ADAM11O75078 769 aa8.36□□□□□ -1.07
UBA3-204ENST00000461522 XP32Q5T750 250 aa8.36□□□□□ -1.07
UBA3-204ENST00000461522 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
UBA3-204ENST00000461522 FOXD4L4Q8WXT5 416 aaPredicted RBP8.36□□□□□ -1.07
UBA3-204ENST00000461522 KLHDC7BQ96G42 594 aa8.36□□□□□ -1.07
UBA3-204ENST00000461522 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
UBA3-204ENST00000461522 PRR23CQ6ZRP0 262 aa8.35□□□□□ -1.07
UBA3-204ENST00000461522 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
UBA3-204ENST00000461522 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
UBA3-204ENST00000461522 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
UBA3-204ENST00000461522 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
UBA3-204ENST00000461522 BRPF3Q9ULD4 1205 aa8.35□□□□□ -1.07
UBA3-204ENST00000461522 DDX3YO15523 660 aaKnown RBP8.34□□□□□ -1.07
UBA3-204ENST00000461522 GLB1P16278 677 aa8.34□□□□□ -1.07
UBA3-204ENST00000461522 BSNDQ8WZ55 320 aa8.34□□□□□ -1.07
UBA3-204ENST00000461522 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
UBA3-204ENST00000461522 VN1R5Q7Z5H4 357 aa8.33□□□□□ -1.08
UBA3-204ENST00000461522 UBASH3BQ8TF42 649 aa8.33□□□□□ -1.08
UBA3-204ENST00000461522 UBL7Q96S82 380 aaPredicted RBP8.33□□□□□ -1.08
UBA3-204ENST00000461522 NDUFB5O43674 189 aa8.32□□□□□ -1.08
UBA3-204ENST00000461522 GALNT12Q8IXK2 581 aa8.32□□□□□ -1.08
UBA3-204ENST00000461522 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
UBA3-204ENST00000461522 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
UBA3-204ENST00000461522 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
UBA3-204ENST00000461522 SLC7A3Q8WY07 619 aa8.31□□□□□ -1.08
UBA3-204ENST00000461522 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
UBA3-204ENST00000461522 CEP41Q9BYV8 373 aa8.31□□□□□ -1.08
UBA3-204ENST00000461522 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
UBA3-204ENST00000461522 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
UBA3-204ENST00000461522 PDE3BQ13370 1112 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms