RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
NECTIN3-202ENST00000461477 POTEMA6NI47 508 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 ERBB4Q15303 1308 aa12.27□□□□□ -0.45
NECTIN3-202ENST00000461477 ECE2O60344 883 aa12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 POTEGQ6S5H5 508 aa12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
NECTIN3-202ENST00000461477 PAPPA2Q9BXP8 1791 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 SNPHO15079 494 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 KIF4BQ2VIQ3 1234 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 A0A0C4DFX4 3053 aa12.25□□□□□ -0.45
NECTIN3-202ENST00000461477 TBC1D8O95759 1140 aa12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 TBC1D16Q8TBP0 767 aa12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 ZNF296Q8WUU4 475 aaPredicted RBP12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
NECTIN3-202ENST00000461477 WTIPA6NIX2 430 aaPredicted RBP12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 VIL1P09327 827 aaKnown RBP12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 PRAMEF18Q5VWM3 479 aa12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
NECTIN3-202ENST00000461477 ZNF280AP59817 542 aaPredicted RBP12.22□□□□□ -0.45
NECTIN3-202ENST00000461477 SCARF1Q14162 830 aa12.22□□□□□ -0.45
NECTIN3-202ENST00000461477 SF3B3Q15393 1217 aaKnown RBP12.22□□□□□ -0.45
NECTIN3-202ENST00000461477 COL6A3P12111 3177 aa12.22□□□□□ -0.45
NECTIN3-202ENST00000461477 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 GMLQ99445 158 aa12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 ISCA1Q9BUE6 129 aa12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 SEC31BQ9NQW1 1179 aa12.21□□□□□ -0.45
NECTIN3-202ENST00000461477 ZNF609O15014 1411 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 MXD3Q9BW11 206 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 CHPF2Q9P2E5 772 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 CEP290O15078 2479 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
NECTIN3-202ENST00000461477 HSP90AB3PQ58FF7 597 aa12.19□□□□□ -0.46
NECTIN3-202ENST00000461477 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
NECTIN3-202ENST00000461477 GPR25O00155 361 aa12.18□□□□□ -0.46
NECTIN3-202ENST00000461477 NBPF9Q3BBW0 867 aa12.18□□□□□ -0.46
NECTIN3-202ENST00000461477 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
NECTIN3-202ENST00000461477 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
NECTIN3-202ENST00000461477 LAMA3Q16787 3333 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 UFL1O94874 794 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 TM4SF4P48230 202 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 RIPK4P57078 832 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 CAP1Q01518 475 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 LAMB1P07942 1786 aa12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
NECTIN3-202ENST00000461477 IRS4O14654 1257 aaPredicted RBP12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 PKN2Q16513 984 aaKnown RBP12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 PLBD2Q8NHP8 589 aa12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 EYA3Q99504 573 aa12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 HDAC9Q9UKV0 1011 aa12.16□□□□□ -0.46
NECTIN3-202ENST00000461477 ST18O60284 1047 aa12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 FKBP1BP68106 108 aa12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 CCDC85AQ96PX6 553 aaPredicted RBP12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 ZC3H12CQ9C0D7 883 aaKnown RBP12.15□□□□□ -0.46
NECTIN3-202ENST00000461477 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 MAPK8IP3Q9UPT6 1336 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 CHL1O00533 1208 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
NECTIN3-202ENST00000461477 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms