RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CASP7P55210 303 aa18.82■□□□□ 0.6
SMPD4-216ENST00000461187 SCARF1Q14162 830 aa18.82■□□□□ 0.6
SMPD4-216ENST00000461187 RGMBQ6NW40 437 aa18.82■□□□□ 0.6
SMPD4-216ENST00000461187 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
SMPD4-216ENST00000461187 PAPPA2Q9BXP8 1791 aa18.82■□□□□ 0.6
SMPD4-216ENST00000461187 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
SMPD4-216ENST00000461187 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
SMPD4-216ENST00000461187 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
SMPD4-216ENST00000461187 VAMP4O75379 141 aa18.8■□□□□ 0.6
SMPD4-216ENST00000461187 FKBP5Q13451 457 aaPredicted RBP18.8■□□□□ 0.6
SMPD4-216ENST00000461187 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
SMPD4-216ENST00000461187 CDCA5Q96FF9 252 aa18.8■□□□□ 0.6
SMPD4-216ENST00000461187 CSF1RP07333 972 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 ITGA6P23229 1130 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
SMPD4-216ENST00000461187 DACT2Q5SW24 774 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 TXNRD3Q86VQ6 643 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 LINS1Q8NG48 757 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
SMPD4-216ENST00000461187 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-216ENST00000461187 PITPNM2Q9BZ72 1349 aa18.78■□□□□ 0.6
SMPD4-216ENST00000461187 ZNF157P51786 506 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-216ENST00000461187 FAM161AQ3B820 660 aa18.78■□□□□ 0.6
SMPD4-216ENST00000461187 MXD3Q9BW11 206 aa18.78■□□□□ 0.6
SMPD4-216ENST00000461187 COA1Q9GZY4 146 aa18.78■□□□□ 0.6
SMPD4-216ENST00000461187 LEMD3Q9Y2U8 911 aa18.78■□□□□ 0.6
SMPD4-216ENST00000461187 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
SMPD4-216ENST00000461187 ZNF804BA4D1E1 1349 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 ANP32CO43423 234 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 SLC10A3P09131 477 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-216ENST00000461187 STRIP1Q5VSL9 837 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 ANKRD2Q9GZV1 360 aa18.76■□□□□ 0.59
SMPD4-216ENST00000461187 KLRK1P26718 216 aa18.75■□□□□ 0.59
SMPD4-216ENST00000461187 NBPF9Q3BBW0 867 aa18.75■□□□□ 0.59
SMPD4-216ENST00000461187 FBXW7Q969H0 707 aa18.75■□□□□ 0.59
SMPD4-216ENST00000461187 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-216ENST00000461187 SCAF8Q9UPN6 1271 aaKnown RBP18.75■□□□□ 0.59
SMPD4-216ENST00000461187 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
SMPD4-216ENST00000461187 MCOLN1Q9GZU1 580 aa18.74■□□□□ 0.59
SMPD4-216ENST00000461187 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 F6X3S4 739 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 WNT10BO00744 389 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 FKBP1BP68106 108 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 FOXO4P98177 505 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 CHRNDQ07001 517 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 OGFOD1Q8N543 542 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 SAGE1Q9NXZ1 904 aa18.73■□□□□ 0.59
SMPD4-216ENST00000461187 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-216ENST00000461187 BEND3Q5T5X7 828 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 RASAL3Q86YV0 1011 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 CSRNP1Q96S65 589 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 IRS2Q9Y4H2 1338 aa18.72■□□□□ 0.59
SMPD4-216ENST00000461187 LAMB1P07942 1786 aa18.71■□□□□ 0.59
SMPD4-216ENST00000461187 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-216ENST00000461187 MMP14P50281 582 aa18.71■□□□□ 0.59
SMPD4-216ENST00000461187 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
SMPD4-216ENST00000461187 MOB2Q70IA6 237 aa18.71■□□□□ 0.59
SMPD4-216ENST00000461187 SNAP23O00161 211 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 TRPA1O75762 1119 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 KCNJ4P48050 445 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 GTF2IP78347 998 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 DGKZQ13574 1117 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 CD209Q9NNX6 404 aa18.7■□□□□ 0.58
SMPD4-216ENST00000461187 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
SMPD4-216ENST00000461187 TAF5LO75529 589 aa18.69■□□□□ 0.58
SMPD4-216ENST00000461187 SASH1O94885 1247 aa18.69■□□□□ 0.58
SMPD4-216ENST00000461187 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
SMPD4-216ENST00000461187 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
SMPD4-216ENST00000461187 KIAA0825Q8IV33 1275 aa18.69■□□□□ 0.58
SMPD4-216ENST00000461187 HELBQ8NG08 1087 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-216ENST00000461187 ZBED3Q96IU2 234 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-216ENST00000461187 UBE2Q2LH0YL09 131 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 RGS19P49795 217 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 LMBR1LQ6UX01 489 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
SMPD4-216ENST00000461187 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
SMPD4-216ENST00000461187 GRM8O00222 908 aa18.67■□□□□ 0.58
SMPD4-216ENST00000461187 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
SMPD4-216ENST00000461187 PDE4DIPQ5VU43 2346 aa18.67■□□□□ 0.58
SMPD4-216ENST00000461187 CERS5Q8N5B7 392 aa18.66■□□□□ 0.58
SMPD4-216ENST00000461187 ZNF594Q96JF6 807 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-216ENST00000461187 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
SMPD4-216ENST00000461187 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-216ENST00000461187 IL1R1P14778 569 aa18.65■□□□□ 0.58
SMPD4-216ENST00000461187 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-216ENST00000461187 APOBEC3FQ8IUX4 373 aaKnown RBP18.65■□□□□ 0.58
SMPD4-216ENST00000461187 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
SMPD4-216ENST00000461187 NF2P35240 595 aa18.64■□□□□ 0.57
SMPD4-216ENST00000461187 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
SMPD4-216ENST00000461187 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
SMPD4-216ENST00000461187 OTOFQ9HC10 1997 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms