RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PRKG1Q13976 671 aa22.31■■□□□ 1.16
TOP3A-202ENST00000461127 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
TOP3A-202ENST00000461127 CCDC85AQ96PX6 553 aaPredicted RBP22.31■■□□□ 1.16
TOP3A-202ENST00000461127 MED23Q9ULK4 1368 aa22.3■■□□□ 1.16
TOP3A-202ENST00000461127 MANSC4A6NHS7 340 aaPredicted RBP22.3■■□□□ 1.16
TOP3A-202ENST00000461127 PCCAP05165 728 aaPredicted RBP22.3■■□□□ 1.16
TOP3A-202ENST00000461127 OTOP1Q7RTM1 612 aa22.3■■□□□ 1.16
TOP3A-202ENST00000461127 CCDC191Q8NCU4 936 aa22.3■■□□□ 1.16
TOP3A-202ENST00000461127 CDC5LQ99459 802 aaKnown RBP22.3■■□□□ 1.16
TOP3A-202ENST00000461127 KIAA0100Q14667 2235 aaKnown RBP22.3■■□□□ 1.16
TOP3A-202ENST00000461127 POTEFA5A3E0 1075 aa22.29■■□□□ 1.16
TOP3A-202ENST00000461127 DACT2Q5SW24 774 aa22.29■■□□□ 1.16
TOP3A-202ENST00000461127 LDLRAD1Q5T700 205 aa22.29■■□□□ 1.16
TOP3A-202ENST00000461127 STRIP1Q5VSL9 837 aa22.29■■□□□ 1.16
TOP3A-202ENST00000461127 ANGEL1Q9UNK9 670 aaKnown RBP22.29■■□□□ 1.16
TOP3A-202ENST00000461127 SASH1O94885 1247 aa22.28■■□□□ 1.16
TOP3A-202ENST00000461127 DUSP27Q5VZP5 1158 aa22.28■■□□□ 1.16
TOP3A-202ENST00000461127 SLC10A4Q96EP9 437 aa22.28■■□□□ 1.16
TOP3A-202ENST00000461127 MYD88Q99836 296 aa22.28■■□□□ 1.16
TOP3A-202ENST00000461127 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
TOP3A-202ENST00000461127 IFNL1Q8IU54 200 aa22.27■■□□□ 1.16
TOP3A-202ENST00000461127 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
TOP3A-202ENST00000461127 MXD3Q9BW11 206 aa22.27■■□□□ 1.16
TOP3A-202ENST00000461127 HTTP42858 3142 aa22.26■■□□□ 1.15
TOP3A-202ENST00000461127 COA1Q9GZY4 146 aa22.26■■□□□ 1.15
TOP3A-202ENST00000461127 ZBTB48P10074 688 aaPredicted RBP22.25■■□□□ 1.15
TOP3A-202ENST00000461127 PPP1R12BO60237 982 aaPredicted RBP22.24■■□□□ 1.15
TOP3A-202ENST00000461127 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
TOP3A-202ENST00000461127 OTUD7BQ6GQQ9 843 aa22.24■■□□□ 1.15
TOP3A-202ENST00000461127 BSDC1Q9NW68 430 aaPredicted RBP22.24■■□□□ 1.15
TOP3A-202ENST00000461127 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.24■■□□□ 1.15
TOP3A-202ENST00000461127 PTPN22Q9Y2R2 807 aa22.24■■□□□ 1.15
TOP3A-202ENST00000461127 RBBP6Q7Z6E9 1792 aaKnown RBP22.24■■□□□ 1.15
TOP3A-202ENST00000461127 COL1A1P02452 1464 aaPredicted RBP22.23■■□□□ 1.15
TOP3A-202ENST00000461127 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
TOP3A-202ENST00000461127 TTLL5Q6EMB2 1281 aa22.23■■□□□ 1.15
TOP3A-202ENST00000461127 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
TOP3A-202ENST00000461127 JARID2Q92833 1246 aaPredicted RBP22.23■■□□□ 1.15
TOP3A-202ENST00000461127 MINPP1Q9UNW1 487 aa22.23■■□□□ 1.15
TOP3A-202ENST00000461127 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
TOP3A-202ENST00000461127 CENPFP49454 3210 aa22.23■■□□□ 1.15
TOP3A-202ENST00000461127 CTSWP56202 376 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 KIAA0825Q8IV33 1275 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 ARMC5Q96C12 935 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 TMEM106CQ9BVX2 250 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
TOP3A-202ENST00000461127 EFCC1Q9HA90 598 aa22.22■■□□□ 1.15
TOP3A-202ENST00000461127 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
TOP3A-202ENST00000461127 WTIPA6NIX2 430 aaPredicted RBP22.21■■□□□ 1.15
TOP3A-202ENST00000461127 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
TOP3A-202ENST00000461127 MAP3K11Q16584 847 aa22.21■■□□□ 1.15
TOP3A-202ENST00000461127 DEFB129Q9H1M3 183 aa22.21■■□□□ 1.15
TOP3A-202ENST00000461127 LEMD3Q9Y2U8 911 aa22.21■■□□□ 1.15
TOP3A-202ENST00000461127 UNCXA6NJT0 531 aa22.2■■□□□ 1.14
TOP3A-202ENST00000461127 IGF2BP3O00425 579 aaKnown RBP eCLIP22.2■■□□□ 1.14
TOP3A-202ENST00000461127 EN2P19622 333 aaPredicted RBP22.2■■□□□ 1.14
TOP3A-202ENST00000461127 CD99L2Q8TCZ2 262 aa22.2■■□□□ 1.14
TOP3A-202ENST00000461127 RUNDC1Q96C34 613 aa22.2■■□□□ 1.14
TOP3A-202ENST00000461127 METTL22Q9BUU2 404 aaPredicted RBP22.2■■□□□ 1.14
TOP3A-202ENST00000461127 DLGAP5Q15398 846 aa22.19■■□□□ 1.14
TOP3A-202ENST00000461127 ZBED3Q96IU2 234 aaPredicted RBP22.19■■□□□ 1.14
TOP3A-202ENST00000461127 FZD1Q9UP38 647 aa22.19■■□□□ 1.14
TOP3A-202ENST00000461127 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
TOP3A-202ENST00000461127 ZNF646O15015 1829 aaPredicted RBP22.19■■□□□ 1.14
TOP3A-202ENST00000461127 SP3Q02447 781 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 CRHR2Q13324 411 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 RALBP1Q15311 655 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 SUPT20HL1Q3ZLR7 823 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 TTLL11Q8NHH1 800 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 CLMNQ96JQ2 1002 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 MBIPQ9NS73 344 aa22.18■■□□□ 1.14
TOP3A-202ENST00000461127 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
TOP3A-202ENST00000461127 IGHMBP2P38935 993 aaKnown RBP22.17■■□□□ 1.14
TOP3A-202ENST00000461127 GTF2IP78347 998 aa22.17■■□□□ 1.14
TOP3A-202ENST00000461127 ARHGEF6Q15052 776 aa22.17■■□□□ 1.14
TOP3A-202ENST00000461127 CHMP4AQ9BY43 222 aa22.17■■□□□ 1.14
TOP3A-202ENST00000461127 GREM2Q9H772 168 aa22.17■■□□□ 1.14
TOP3A-202ENST00000461127 MYH3P11055 1940 aa22.16■■□□□ 1.14
TOP3A-202ENST00000461127 MYO1BO43795 1136 aa22.16■■□□□ 1.14
TOP3A-202ENST00000461127 IREB2P48200 963 aaKnown RBP22.16■■□□□ 1.14
TOP3A-202ENST00000461127 NBPF11Q86T75 865 aa22.16■■□□□ 1.14
TOP3A-202ENST00000461127 TXNRD3Q86VQ6 643 aa22.16■■□□□ 1.14
TOP3A-202ENST00000461127 ANKRD2Q9GZV1 360 aa22.16■■□□□ 1.14
TOP3A-202ENST00000461127 LAMB1P07942 1786 aa22.15■■□□□ 1.14
TOP3A-202ENST00000461127 ZNF804BA4D1E1 1349 aa22.15■■□□□ 1.14
TOP3A-202ENST00000461127 COLQQ9Y215 455 aaPredicted RBP22.15■■□□□ 1.14
TOP3A-202ENST00000461127 BRCA2P51587 3418 aa22.15■■□□□ 1.14
TOP3A-202ENST00000461127 ELL2O00472 640 aaPredicted RBP22.14■■□□□ 1.13
TOP3A-202ENST00000461127 KCNJ4P48050 445 aa22.14■■□□□ 1.13
TOP3A-202ENST00000461127 WDR43Q15061 677 aaKnown RBP eCLIP22.14■■□□□ 1.13
TOP3A-202ENST00000461127 MAP3K2Q9Y2U5 619 aa22.14■■□□□ 1.13
TOP3A-202ENST00000461127 CEP290O15078 2479 aa22.13■■□□□ 1.13
TOP3A-202ENST00000461127 NEXNQ0ZGT2 675 aa22.13■■□□□ 1.13
TOP3A-202ENST00000461127 SLC9C1Q4G0N8 1177 aa22.13■■□□□ 1.13
TOP3A-202ENST00000461127 MTMR14Q8NCE2 650 aa22.13■■□□□ 1.13
TOP3A-202ENST00000461127 ZNF333Q96JL9 665 aa22.13■■□□□ 1.13
TOP3A-202ENST00000461127 SLC4A8Q2Y0W8 1093 aa22.12■■□□□ 1.13
TOP3A-202ENST00000461127 ANKRD13AQ8IZ07 590 aa22.12■■□□□ 1.13
TOP3A-202ENST00000461127 MPHOSPH8Q99549 860 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms