RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 SSBP4Q9BWG4 385 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 RTCBQ9Y3I0 505 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 FMN1Q68DA7 1419 aa7.33□□□□□ -1.24
ATPAF1-203ENST00000460928 EPRSP07814 1512 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 MAGI3Q5TCQ9 1506 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 SASH3O75995 380 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 ELMSAN1Q6PJG2 1045 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 KRT25Q7Z3Z0 450 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 FBXO11Q86XK2 927 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 CASKIN1Q8WXD9 1431 aa7.32□□□□□ -1.24
ATPAF1-203ENST00000460928 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-203ENST00000460928 TLR7Q9NYK1 1049 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-203ENST00000460928 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 COX20Q5RI15 118 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 WFDC8Q8IUA0 241 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 COL26A1Q96A83 441 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 USP21Q9UK80 565 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
ATPAF1-203ENST00000460928 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 XYLBO75191 536 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 SOX18P35713 384 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 PLAURQ03405 335 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 OCLNQ16625 522 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 GZF1Q9H116 711 aaPredicted RBP7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 ZMIZ1Q9ULJ6 1067 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 KCNMB2Q9Y691 235 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 KIF14Q15058 1648 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 FYCO1Q9BQS8 1478 aa7.29□□□□□ -1.24
ATPAF1-203ENST00000460928 PLEKHD1A6NEE1 506 aa7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 MLLT1Q03111 559 aaPredicted RBP7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 IGF2-ASQ6U949 168 aa7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 RGL4Q8IZJ4 473 aa7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 SMG9Q9H0W8 520 aaKnown RBP7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 USTQ9Y2C2 406 aa7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 PTPRMP28827 1452 aa7.28□□□□□ -1.24
ATPAF1-203ENST00000460928 PSAPP07602 524 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 EIF2AK2P19525 551 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 ARTNQ5T4W7 220 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 TP53INP1Q96A56 240 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 USP20Q9Y2K6 914 aa7.27□□□□□ -1.25
ATPAF1-203ENST00000460928 TTC37Q6PGP7 1564 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 LOC102724428A0A0B4J2F2 783 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 DLL1O00548 723 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 MMP20O60882 483 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 DEAF1O75398 565 aaPredicted RBP7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 BRD2P25440 801 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 SIK1P57059 783 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 TMCO4Q5TGY1 634 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 C16orf46Q6P387 395 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 ETFBKMTQ8IXQ9 262 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 PLD4Q96BZ4 506 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 SRA1Q9HD15 236 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 ZFP64Q9NPA5 681 aa7.26□□□□□ -1.25
ATPAF1-203ENST00000460928 GLI2P10070 1586 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 PRMT3O60678 531 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 BRD1O95696 1058 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 NOS3P29474 1203 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 HFE2Q6ZVN8 426 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
ATPAF1-203ENST00000460928 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 ATG7O95352 703 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 GHRHP01286 108 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 TRIP4Q15650 581 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 NLRP13Q86W25 1043 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 MAP4K3Q8IVH8 894 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 CACTIN-AS1Q8N1I8 211 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 DCAF11Q8TEB1 546 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 STK32AQ8WU08 396 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 SAP130Q9H0E3 1048 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 FAM13BQ9NYF5 915 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 TROQ12816 1431 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-203ENST00000460928 MAP3K4Q9Y6R4 1608 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 TNFRSF10BO14763 440 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 IREB2P48200 963 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 HSPA2P54652 639 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 KCNA1Q09470 495 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms