RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 L3MBTL3Q96JM7 780 aaPredicted RBP27.86■■■□□ 2.05
C9orf3-209ENST00000460573 FZD9O00144 591 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 TAF5LO75529 589 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 PDE8BO95263 885 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 LMOD1P29536 600 aaPredicted RBP27.85■■■□□ 2.05
C9orf3-209ENST00000460573 G3BP1Q13283 466 aaKnown RBP eCLIP27.85■■■□□ 2.05
C9orf3-209ENST00000460573 UBE4AQ14139 1066 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 AOC3Q16853 763 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 GPC2Q8N158 579 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 KLRG1Q96E93 195 aa27.85■■■□□ 2.05
C9orf3-209ENST00000460573 TAF1DQ9H5J8 278 aaPredicted RBP27.84■■■□□ 2.05
C9orf3-209ENST00000460573 CEP126Q9P2H0 1117 aa27.84■■■□□ 2.05
C9orf3-209ENST00000460573 NOP58Q9Y2X3 529 aaKnown RBP27.84■■■□□ 2.05
C9orf3-209ENST00000460573 MED23Q9ULK4 1368 aa27.84■■■□□ 2.05
C9orf3-209ENST00000460573 C15orf52Q6ZUT6 534 aaKnown RBP27.83■■■□□ 2.05
C9orf3-209ENST00000460573 LDHDQ86WU2 507 aa27.83■■■□□ 2.05
C9orf3-209ENST00000460573 VGLL2Q8N8G2 317 aa27.83■■■□□ 2.05
C9orf3-209ENST00000460573 SURF6O75683 361 aaKnown RBP27.82■■■□□ 2.04
C9orf3-209ENST00000460573 EPHX2P34913 555 aa27.82■■■□□ 2.04
C9orf3-209ENST00000460573 DNAJC5GQ8N7S2 189 aa27.82■■■□□ 2.04
C9orf3-209ENST00000460573 A0A1B0GUL6 1792 aa27.81■■■□□ 2.04
C9orf3-209ENST00000460573 RIMBP2O15034 1052 aa27.81■■■□□ 2.04
C9orf3-209ENST00000460573 SIRT2Q8IXJ6 389 aa27.81■■■□□ 2.04
C9orf3-209ENST00000460573 POTEIP0CG38 1075 aa27.8■■■□□ 2.04
C9orf3-209ENST00000460573 POTEJP0CG39 1038 aa27.8■■■□□ 2.04
C9orf3-209ENST00000460573 PUM3Q15397 648 aaKnown RBP27.8■■■□□ 2.04
C9orf3-209ENST00000460573 HSP90AB4PQ58FF6 505 aa27.8■■■□□ 2.04
C9orf3-209ENST00000460573 PNMA8AQ86V59 439 aaPredicted RBP27.8■■■□□ 2.04
C9orf3-209ENST00000460573 WTIPA6NIX2 430 aaPredicted RBP27.79■■■□□ 2.04
C9orf3-209ENST00000460573 G3V3G9 751 aa27.79■■■□□ 2.04
C9orf3-209ENST00000460573 DCAF8Q5TAQ9 597 aa27.79■■■□□ 2.04
C9orf3-209ENST00000460573 GPR101Q96P66 508 aaPredicted RBP27.79■■■□□ 2.04
C9orf3-209ENST00000460573 ZNRF3Q9ULT6 936 aa27.79■■■□□ 2.04
C9orf3-209ENST00000460573 OS9Q13438 667 aaPredicted RBP27.78■■■□□ 2.04
C9orf3-209ENST00000460573 EXOC6Q8TAG9 804 aa27.78■■■□□ 2.04
C9orf3-209ENST00000460573 AKAP2Q9Y2D5 859 aa27.78■■■□□ 2.04
C9orf3-209ENST00000460573 IFIT1P09914 478 aaKnown RBP27.77■■■□□ 2.04
C9orf3-209ENST00000460573 ERC1Q8IUD2 1116 aa27.77■■■□□ 2.04
C9orf3-209ENST00000460573 LPIN2Q92539 896 aa27.77■■■□□ 2.04
C9orf3-209ENST00000460573 COA1Q9GZY4 146 aa27.77■■■□□ 2.04
C9orf3-209ENST00000460573 IRS2Q9Y4H2 1338 aa27.76■■■□□ 2.03
C9orf3-209ENST00000460573 SNAP23O00161 211 aa27.76■■■□□ 2.03
C9orf3-209ENST00000460573 FGFR2P21802 821 aa27.76■■■□□ 2.03
C9orf3-209ENST00000460573 PODNQ7Z5L7 613 aa27.76■■■□□ 2.03
C9orf3-209ENST00000460573 COL4A5P29400 1685 aa27.75■■■□□ 2.03
C9orf3-209ENST00000460573 SLC5A1P13866 664 aa27.75■■■□□ 2.03
C9orf3-209ENST00000460573 TFCP2Q12800 502 aa27.75■■■□□ 2.03
C9orf3-209ENST00000460573 ZNF804AQ7Z570 1209 aa27.75■■■□□ 2.03
C9orf3-209ENST00000460573 PCDHB15Q9Y5E8 787 aa27.75■■■□□ 2.03
C9orf3-209ENST00000460573 ECE2O60344 883 aa27.74■■■□□ 2.03
C9orf3-209ENST00000460573 DOK7Q18PE1 504 aa27.74■■■□□ 2.03
C9orf3-209ENST00000460573 TXNRD3Q86VQ6 643 aa27.74■■■□□ 2.03
C9orf3-209ENST00000460573 DBNDD1Q9H9R9 158 aa27.74■■■□□ 2.03
C9orf3-209ENST00000460573 SASH1O94885 1247 aa27.73■■■□□ 2.03
C9orf3-209ENST00000460573 ATP2B3Q16720 1220 aa27.73■■■□□ 2.03
C9orf3-209ENST00000460573 GPR108Q9NPR9 543 aa27.73■■■□□ 2.03
C9orf3-209ENST00000460573 RAB11FIP3O75154 756 aa27.72■■■□□ 2.03
C9orf3-209ENST00000460573 KLRK1P26718 216 aa27.72■■■□□ 2.03
C9orf3-209ENST00000460573 CAVIN4Q5BKX8 364 aa27.72■■■□□ 2.03
C9orf3-209ENST00000460573 CREBZFQ9NS37 354 aa27.72■■■□□ 2.03
C9orf3-209ENST00000460573 EXOC6BQ9Y2D4 811 aa27.72■■■□□ 2.03
C9orf3-209ENST00000460573 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
C9orf3-209ENST00000460573 TNIP1Q15025 636 aa27.71■■■□□ 2.03
C9orf3-209ENST00000460573 YDJCA8MPS7 323 aa27.7■■■□□ 2.02
C9orf3-209ENST00000460573 HIBADHP31937 336 aaKnown RBP27.7■■■□□ 2.02
C9orf3-209ENST00000460573 FAM84BQ96KN1 310 aaPredicted RBP27.7■■■□□ 2.02
C9orf3-209ENST00000460573 CXCL9Q07325 125 aa27.69■■■□□ 2.02
C9orf3-209ENST00000460573 CIAPIN1Q6FI81 312 aa27.69■■■□□ 2.02
C9orf3-209ENST00000460573 FBXO33Q7Z6M2 555 aa27.69■■■□□ 2.02
C9orf3-209ENST00000460573 VPS37DQ86XT2 251 aa27.69■■■□□ 2.02
C9orf3-209ENST00000460573 CD209Q9NNX6 404 aa27.69■■■□□ 2.02
C9orf3-209ENST00000460573 IL1R1P14778 569 aa27.68■■■□□ 2.02
C9orf3-209ENST00000460573 MAP1SQ66K74 1059 aaPredicted RBP27.68■■■□□ 2.02
C9orf3-209ENST00000460573 JMYQ8N9B5 988 aa27.68■■■□□ 2.02
C9orf3-209ENST00000460573 RHPN1Q8TCX5 695 aa27.68■■■□□ 2.02
C9orf3-209ENST00000460573 KIF1BPQ96EK5 621 aa27.68■■■□□ 2.02
C9orf3-209ENST00000460573 DCTPP1Q9H773 170 aa27.68■■■□□ 2.02
C9orf3-209ENST00000460573 A0A1B0GUL7 405 aa27.67■■■□□ 2.02
C9orf3-209ENST00000460573 GYG1P46976 350 aa27.67■■■□□ 2.02
C9orf3-209ENST00000460573 HDAC1Q13547 482 aaPredicted RBP27.67■■■□□ 2.02
C9orf3-209ENST00000460573 CNTROBQ8N137 903 aa27.67■■■□□ 2.02
C9orf3-209ENST00000460573 MKRN1Q9UHC7 482 aaKnown RBP27.67■■■□□ 2.02
C9orf3-209ENST00000460573 RAD17O75943 681 aa27.66■■■□□ 2.02
C9orf3-209ENST00000460573 EPS15P42566 896 aa27.66■■■□□ 2.02
C9orf3-209ENST00000460573 SCNN1DP51172 638 aa27.66■■■□□ 2.02
C9orf3-209ENST00000460573 TIMM10P62072 90 aa27.66■■■□□ 2.02
C9orf3-209ENST00000460573 TMEM88BA6NKF7 163 aa27.65■■■□□ 2.02
C9orf3-209ENST00000460573 TNNI3KQ59H18 835 aa27.65■■■□□ 2.02
C9orf3-209ENST00000460573 USP50Q70EL3 339 aaPredicted RBP27.65■■■□□ 2.02
C9orf3-209ENST00000460573 TDRD7Q8NHU6 1098 aaKnown RBP27.65■■■□□ 2.02
C9orf3-209ENST00000460573 NEUROD6Q96NK8 337 aa27.65■■■□□ 2.02
C9orf3-209ENST00000460573 RWDD1Q9H446 243 aaPredicted RBP27.65■■■□□ 2.02
C9orf3-209ENST00000460573 FPGT-TNNI3KV9GXZ4 949 aa27.65■■■□□ 2.02
C9orf3-209ENST00000460573 ZNF609O15014 1411 aa27.65■■■□□ 2.02
C9orf3-209ENST00000460573 USP17L3A6NCW0 530 aa27.64■■■□□ 2.02
C9orf3-209ENST00000460573 USP17L4A6NCW7 530 aa27.64■■■□□ 2.02
C9orf3-209ENST00000460573 USP17L1Q7RTZ2 530 aa27.64■■■□□ 2.02
C9orf3-209ENST00000460573 GNL3LQ9NVN8 582 aaKnown RBP27.64■■■□□ 2.02
C9orf3-209ENST00000460573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.64■■■□□ 2.02
C9orf3-209ENST00000460573 PASKQ96RG2 1323 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms