RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-205ENST00000460485 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
ERCC3-205ENST00000460485 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 SIK1P57059 783 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 HTRA3P83110 453 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
ERCC3-205ENST00000460485 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 MMP10P09238 476 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 MCMDC2Q4G0Z9 681 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
ERCC3-205ENST00000460485 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
ERCC3-205ENST00000460485 DOCK2Q92608 1830 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 IRS4O14654 1257 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 HMGB1P09429 215 aaKnown RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 CASTP20810 708 aaKnown RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 ATP6V1AP38606 617 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 CLEC4GQ6UXB4 293 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 RUFY3Q7L099 469 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
ERCC3-205ENST00000460485 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-205ENST00000460485 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 IFIT1P09914 478 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 PTH1RQ03431 593 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 C9orf131Q5VYM1 1079 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 ZSCAN25Q6NSZ9 544 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 FAM227BQ96M60 508 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 DNAJC2Q99543 621 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
ERCC3-205ENST00000460485 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 KIAA1551Q9HCM1 1747 aa16.84■□□□□ 0.29
ERCC3-205ENST00000460485 A0A1B0GUL6 1792 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 SLC27A2O14975 620 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 TAF5LO75529 589 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
ERCC3-205ENST00000460485 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
ERCC3-205ENST00000460485 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.28
ERCC3-205ENST00000460485 BRD1O95696 1058 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 ITGA6P23229 1130 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 AK2P54819 239 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 HLFQ16534 295 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 ZMYM1Q5SVZ6 1142 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
ERCC3-205ENST00000460485 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
ERCC3-205ENST00000460485 GNPATO15228 680 aa16.81■□□□□ 0.28
ERCC3-205ENST00000460485 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
ERCC3-205ENST00000460485 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
ERCC3-205ENST00000460485 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
ERCC3-205ENST00000460485 LDHAL6AQ6ZMR3 332 aa16.81■□□□□ 0.28
ERCC3-205ENST00000460485 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
ERCC3-205ENST00000460485 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERCC3-205ENST00000460485 RIPOR2Q9Y4F9 1068 aa16.81■□□□□ 0.28
ERCC3-205ENST00000460485 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
ERCC3-205ENST00000460485 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 CAMTA2O94983 1202 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 MBD3O95983 291 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 DPEP1P16444 411 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 KCNA3P22001 575 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
ERCC3-205ENST00000460485 XAGE2Q96GT9 111 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
ERCC3-205ENST00000460485 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 GOLIM4O00461 696 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 SLC34A2O95436 690 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
ERCC3-205ENST00000460485 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
ERCC3-205ENST00000460485 PDCP20941 246 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
ERCC3-205ENST00000460485 GPTP24298 496 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms