RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 ZNF804BA4D1E1 1349 aa13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 LAMB2P55268 1798 aa13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 UFL1O94874 794 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 FKBP4Q02790 459 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 RHPN1Q8TCX5 695 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
SMNDC1-203ENST00000460483 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 CCDC158Q5M9N0 1113 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
SMNDC1-203ENST00000460483 GPSM2P81274 684 aa13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 TFCP2Q12800 502 aa13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 PUS3Q9BZE2 481 aaKnown RBP13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
SMNDC1-203ENST00000460483 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
SMNDC1-203ENST00000460483 APBB1O00213 710 aa13.51□□□□□ -0.25
SMNDC1-203ENST00000460483 FRAT2O75474 233 aaPredicted RBP13.51□□□□□ -0.25
SMNDC1-203ENST00000460483 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 MED23Q9ULK4 1368 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 TAF5LO75529 589 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 LMNB1P20700 586 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 TNNI3KQ59H18 835 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 FPGT-TNNI3KV9GXZ4 949 aa13.5□□□□□ -0.25
SMNDC1-203ENST00000460483 SEMA3EO15041 775 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 ERC2O15083 957 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 SASH1O94885 1247 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 AACSQ86V21 672 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 CHD1LQ86WJ1 897 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
SMNDC1-203ENST00000460483 ZC3H4Q9UPT8 1303 aaKnown RBP13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 IGSF3O75054 1194 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 IGHDP01880 384 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 FGFR2P21802 821 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 NUCB1Q02818 461 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
SMNDC1-203ENST00000460483 ANKRD31Q8N7Z5 1873 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 TIMM10P62072 90 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 ZGPATQ8N5A5 531 aaKnown RBP13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 XAGE2Q96GT9 111 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 MYH3P11055 1940 aa13.47□□□□□ -0.25
SMNDC1-203ENST00000460483 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 YBX3P16989 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 MMP14P50281 582 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 TNIP1Q15025 636 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 ZNF277Q9NRM2 450 aaPredicted RBP13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 DENND2AQ9ULE3 1009 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 ZNRF3Q9ULT6 936 aa13.46□□□□□ -0.25
SMNDC1-203ENST00000460483 RIMBP2O15034 1052 aa13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 FBXO33Q7Z6M2 555 aa13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 ECHDC1Q9NTX5 307 aa13.45□□□□□ -0.26
SMNDC1-203ENST00000460483 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 NFKBIEO00221 500 aa13.44□□□□□ -0.26
SMNDC1-203ENST00000460483 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms