RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 GPR162Q16538 588 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 PSMD1Q99460 953 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 LEMD3Q9Y2U8 911 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 COL4A5P29400 1685 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 APBB1O00213 710 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-211ENST00000460176 UFL1O94874 794 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 RASSF7Q02833 373 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 PUM3Q15397 648 aaKnown RBP12.65□□□□□ -0.38
GARNL3-211ENST00000460176 KIF1BPQ96EK5 621 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-211ENST00000460176 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
GARNL3-211ENST00000460176 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.39
GARNL3-211ENST00000460176 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 C6orf229H3BNL8 230 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 KLRK1P26718 216 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 KCNJ4P48050 445 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 PRELPP51888 382 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 UBE4AQ14139 1066 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 LPIN2Q92539 896 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 LRRCC1Q9C099 1032 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 IL1RAPL2Q9NP60 686 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
GARNL3-211ENST00000460176 PSME4Q14997 1843 aa12.63□□□□□ -0.39
GARNL3-211ENST00000460176 A0A1B0GUL7 405 aa12.63□□□□□ -0.39
GARNL3-211ENST00000460176 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-211ENST00000460176 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
GARNL3-211ENST00000460176 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
GARNL3-211ENST00000460176 TXNRD3Q86VQ6 643 aa12.63□□□□□ -0.39
GARNL3-211ENST00000460176 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-211ENST00000460176 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
GARNL3-211ENST00000460176 SLC5A1P13866 664 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
GARNL3-211ENST00000460176 TIMM10P62072 90 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 AOC3Q16853 763 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-211ENST00000460176 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 EYA3Q99504 573 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 CHD4Q14839 1912 aa12.62□□□□□ -0.39
GARNL3-211ENST00000460176 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 IFIT1P09914 478 aaKnown RBP12.61□□□□□ -0.39
GARNL3-211ENST00000460176 ADORA1P30542 326 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 NUCB1Q02818 461 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 WASHC4Q2M389 1173 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-211ENST00000460176 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
GARNL3-211ENST00000460176 TLR7Q9NYK1 1049 aaKnown RBP12.61□□□□□ -0.39
GARNL3-211ENST00000460176 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
GARNL3-211ENST00000460176 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
GARNL3-211ENST00000460176 PPIP5K2O43314 1243 aa12.6□□□□□ -0.39
GARNL3-211ENST00000460176 GYG1P46976 350 aa12.6□□□□□ -0.39
GARNL3-211ENST00000460176 AACSQ86V21 672 aa12.6□□□□□ -0.39
GARNL3-211ENST00000460176 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
GARNL3-211ENST00000460176 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
GARNL3-211ENST00000460176 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
GARNL3-211ENST00000460176 CCDC8Q9H0W5 538 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-211ENST00000460176 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
GARNL3-211ENST00000460176 AKAP11Q9UKA4 1901 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 LMNB1P20700 586 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 FBXO33Q7Z6M2 555 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 CHD1LQ86WJ1 897 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-211ENST00000460176 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
GARNL3-211ENST00000460176 HIBADHP31937 336 aaKnown RBP12.58□□□□□ -0.4
GARNL3-211ENST00000460176 PHKA1P46020 1223 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 BCAMP50895 628 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-211ENST00000460176 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-211ENST00000460176 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 BCL11AQ9H165 835 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 DBNDD1Q9H9R9 158 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-211ENST00000460176 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
GARNL3-211ENST00000460176 ECE2O60344 883 aa12.57□□□□□ -0.4
GARNL3-211ENST00000460176 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms