RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MAP2K2P36507 400 aa28.96■■■□□ 2.23
PTPN4-207ENST00000460162 GMLQ99445 158 aa28.96■■■□□ 2.23
PTPN4-207ENST00000460162 WTIPA6NIX2 430 aaPredicted RBP28.95■■■□□ 2.22
PTPN4-207ENST00000460162 HSPA8P11142 646 aaKnown RBP28.95■■■□□ 2.22
PTPN4-207ENST00000460162 COA1Q9GZY4 146 aa28.95■■■□□ 2.22
PTPN4-207ENST00000460162 ANKRD18BA2A2Z9 1011 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 ADM5C9JUS6 153 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 USP17L8P0C7I0 530 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 LBX1P52954 281 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 SULF1Q8IWU6 871 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 BEGAINQ9BUH8 593 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 ZNF804BA4D1E1 1349 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 MYO3BQ8WXR4 1341 aa28.94■■■□□ 2.22
PTPN4-207ENST00000460162 MYOZ2Q9NPC6 264 aa28.92■■■□□ 2.22
PTPN4-207ENST00000460162 AOC2O75106 756 aa28.91■■■□□ 2.22
PTPN4-207ENST00000460162 HUNKP57058 714 aa28.91■■■□□ 2.22
PTPN4-207ENST00000460162 FOXO4P98177 505 aa28.91■■■□□ 2.22
PTPN4-207ENST00000460162 GBA2Q9HCG7 927 aaPredicted RBP28.91■■■□□ 2.22
PTPN4-207ENST00000460162 PITPNM2Q9BZ72 1349 aa28.91■■■□□ 2.22
PTPN4-207ENST00000460162 GRM8O00222 908 aa28.9■■■□□ 2.22
PTPN4-207ENST00000460162 CHRNDQ07001 517 aa28.9■■■□□ 2.22
PTPN4-207ENST00000460162 IFIT5Q13325 482 aaKnown RBP28.9■■■□□ 2.22
PTPN4-207ENST00000460162 DACT2Q5SW24 774 aa28.9■■■□□ 2.22
PTPN4-207ENST00000460162 STRIP1Q5VSL9 837 aa28.9■■■□□ 2.22
PTPN4-207ENST00000460162 DLK2Q6UY11 383 aa28.9■■■□□ 2.22
PTPN4-207ENST00000460162 ASTN2O75129 1339 aaPredicted RBP28.9■■■□□ 2.22
PTPN4-207ENST00000460162 CAPN15O75808 1086 aa28.89■■■□□ 2.22
PTPN4-207ENST00000460162 ALDH1L1O75891 902 aa28.89■■■□□ 2.22
PTPN4-207ENST00000460162 BRPF1P55201 1214 aaPredicted RBP28.89■■■□□ 2.22
PTPN4-207ENST00000460162 ANGEL2Q5VTE6 544 aaKnown RBP28.89■■■□□ 2.22
PTPN4-207ENST00000460162 TXNRD3Q86VQ6 643 aa28.89■■■□□ 2.22
PTPN4-207ENST00000460162 KLRK1P26718 216 aa28.88■■■□□ 2.21
PTPN4-207ENST00000460162 KCNJ4P48050 445 aa28.88■■■□□ 2.21
PTPN4-207ENST00000460162 SCARF1Q14162 830 aa28.88■■■□□ 2.21
PTPN4-207ENST00000460162 C2orf69Q8N8R5 385 aa28.88■■■□□ 2.21
PTPN4-207ENST00000460162 NOGQ13253 232 aa28.87■■■□□ 2.21
PTPN4-207ENST00000460162 CHMP3Q9Y3E7 222 aa28.87■■■□□ 2.21
PTPN4-207ENST00000460162 PAPPA2Q9BXP8 1791 aa28.87■■■□□ 2.21
PTPN4-207ENST00000460162 CA12O43570 354 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 MMP14P50281 582 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 OGFOD1Q8N543 542 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 FBXW7Q969H0 707 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 CDCA5Q96FF9 252 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 SRCIN1Q9C0H9 1055 aa28.86■■■□□ 2.21
PTPN4-207ENST00000460162 SLC4A10Q6U841 1118 aa28.85■■■□□ 2.21
PTPN4-207ENST00000460162 LMBR1LQ6UX01 489 aa28.85■■■□□ 2.21
PTPN4-207ENST00000460162 C9orf78Q9NZ63 289 aaPredicted RBP28.85■■■□□ 2.21
PTPN4-207ENST00000460162 EPHA10Q5JZY3 1008 aa28.84■■■□□ 2.21
PTPN4-207ENST00000460162 RGMBQ6NW40 437 aa28.84■■■□□ 2.21
PTPN4-207ENST00000460162 C15orf52Q6ZUT6 534 aaKnown RBP28.84■■■□□ 2.21
PTPN4-207ENST00000460162 IRS2Q9Y4H2 1338 aa28.84■■■□□ 2.21
PTPN4-207ENST00000460162 E9PSI1 815 aa28.83■■■□□ 2.21
PTPN4-207ENST00000460162 CCDC57Q2TAC2 916 aa28.83■■■□□ 2.21
PTPN4-207ENST00000460162 MXD3Q9BW11 206 aa28.83■■■□□ 2.21
PTPN4-207ENST00000460162 TTLL5Q6EMB2 1281 aa28.82■■■□□ 2.2
PTPN4-207ENST00000460162 CCDC102AQ96A19 550 aa28.81■■■□□ 2.2
PTPN4-207ENST00000460162 CD209Q9NNX6 404 aa28.81■■■□□ 2.2
PTPN4-207ENST00000460162 FAM155AB1AL88 458 aaPredicted RBP28.8■■■□□ 2.2
PTPN4-207ENST00000460162 TAF5LO75529 589 aa28.8■■■□□ 2.2
PTPN4-207ENST00000460162 FKBP1BP68106 108 aa28.8■■■□□ 2.2
PTPN4-207ENST00000460162 TAF7LQ5H9L4 462 aa28.8■■■□□ 2.2
PTPN4-207ENST00000460162 PTPRCP08575 1304 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 ECM29Q5VYK3 1845 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 WNT10BO00744 389 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 GTF2IP78347 998 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 NBPF9Q3BBW0 867 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 HDAC9Q9UKV0 1011 aa28.79■■■□□ 2.2
PTPN4-207ENST00000460162 UTYO14607 1347 aa28.78■■■□□ 2.2
PTPN4-207ENST00000460162 LDHAL6AQ6ZMR3 332 aa28.78■■■□□ 2.2
PTPN4-207ENST00000460162 ZNF804AQ7Z570 1209 aa28.78■■■□□ 2.2
PTPN4-207ENST00000460162 MRPL50Q8N5N7 158 aaKnown RBP28.78■■■□□ 2.2
PTPN4-207ENST00000460162 HELBQ8NG08 1087 aaPredicted RBP28.78■■■□□ 2.2
PTPN4-207ENST00000460162 CNNM1Q9NRU3 951 aa28.78■■■□□ 2.2
PTPN4-207ENST00000460162 ZNF157P51786 506 aaPredicted RBP28.77■■■□□ 2.2
PTPN4-207ENST00000460162 KIAA0825Q8IV33 1275 aa28.77■■■□□ 2.2
PTPN4-207ENST00000460162 ZNF594Q96JF6 807 aaPredicted RBP28.77■■■□□ 2.2
PTPN4-207ENST00000460162 SNAP23O00161 211 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 SLC10A3P09131 477 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 SUCLG2Q96I99 432 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 ZIC5Q96T25 663 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 TSKSQ9UJT2 592 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 ARAP2Q8WZ64 1704 aa28.76■■■□□ 2.19
PTPN4-207ENST00000460162 SASH1O94885 1247 aa28.75■■■□□ 2.19
PTPN4-207ENST00000460162 IL1R1P14778 569 aa28.75■■■□□ 2.19
PTPN4-207ENST00000460162 COL1A1P02452 1464 aaPredicted RBP28.74■■■□□ 2.19
PTPN4-207ENST00000460162 NBPF7P0C2Y1 421 aaPredicted RBP28.74■■■□□ 2.19
PTPN4-207ENST00000460162 SLFN5Q08AF3 891 aa28.74■■■□□ 2.19
PTPN4-207ENST00000460162 KAZALD1Q96I82 304 aa28.74■■■□□ 2.19
PTPN4-207ENST00000460162 AKAP11Q9UKA4 1901 aa28.73■■■□□ 2.19
PTPN4-207ENST00000460162 FKBP1AP62942 108 aaKnown RBP28.72■■■□□ 2.19
PTPN4-207ENST00000460162 APOBEC3FQ8IUX4 373 aaKnown RBP28.72■■■□□ 2.19
PTPN4-207ENST00000460162 SSH1Q8WYL5 1049 aa28.72■■■□□ 2.19
PTPN4-207ENST00000460162 ZBED3Q96IU2 234 aaPredicted RBP28.72■■■□□ 2.19
PTPN4-207ENST00000460162 KIF23Q02241 960 aaPredicted RBP28.71■■■□□ 2.19
PTPN4-207ENST00000460162 RABL6Q3YEC7 729 aaPredicted RBP28.71■■■□□ 2.19
PTPN4-207ENST00000460162 RASAL3Q86YV0 1011 aa28.71■■■□□ 2.19
PTPN4-207ENST00000460162 CERS5Q8N5B7 392 aa28.71■■■□□ 2.19
PTPN4-207ENST00000460162 SAGE1Q9NXZ1 904 aa28.71■■■□□ 2.19
PTPN4-207ENST00000460162 SCAF8Q9UPN6 1271 aaKnown RBP28.71■■■□□ 2.19
PTPN4-207ENST00000460162 NF2P35240 595 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms